Oncorhynchus keta (chum salmon): 118363424 Help Entry 118363424         CDS       T09424                                  Name (RefSeq) protocadherin-15-like isoform X1   KO K16500   protocadherin-15 Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:oke00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     118363424  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:oke03037]     118363424    04515 Cell adhesion molecules [BR:oke04515]     118363424 Cilium and associated proteins [BR:oke03037]  Primary cilia and associated proteins   USH complex and associated proteins    118363424 Cell adhesion molecules [BR:oke04515]  Cadherins   Protocadherins    118363424 SSDB OrthologParalogGFIT Motif Pfam:  Cadherin ECD PCDH15_12th Cadherin_FAT4_N Ig_Cad99C_N Cadherin_CELSR2_9th Cadherin_2 Big_9 CDH23_a-b Ig_SMCHD1_6th Ig_BT4661_4th Motif Other DBs NCBI-GeneID:  118363424 NCBI-ProteinID:  XP_052347831 LinkDB All DBs Position 3:complement(18793321..19112103) Genome browser AA seq 1716 aa AA seqDB search MQRRSWHFKWLGIGLLLLATCCLSQDTDECKLSRTGPPATIVAIDEESPNGTLLVENMQI QGRVEDPGRTISLSLRDNYNHWVILDPVRQRLYLNSTGRALDRDPPSYIHSIVVQVQCTN ELVGTVILHEVRIVVRDRNDNAPRFQQPRYYVAINELTPVGTTIFSGFTGNNGALDIDDG PNGQIEYIIQYNPTDPAANRTFDIPLTLSGSVVLRERLNYEEITRYLVLIQANDRAPYPN ERRTATTTLTVDVLDGDDLGPMFLPCSLVDNTRDCSPLTYRVHILELTDPSKVNPVNVTP VIQAVDQDRNIQPPSQRPGILYSILIGKPETYVDFFSLNRTTAELQLLKPLIRGLYNRFD LVIKAEQDNGHPLPAFANLHIEVLDENNQSPFFLEATYQGFITESAPVGTTVFTDASLTT PLGINVLDNDIEETKDPMLQISLDNYNTIFTVTPSGITRYLTLLKPVDREEQHSYTFTMV ASDGVQESTPVAINITVIDANDNTPTFPNTSYSVNVYTDMQPGETILQLTALDADGGPNG LVTYKILAGDQGHFIINNRSGVITVVPGVSLAVGRSYTLTVKAVDSGPGSQRRSSITTVY IEVLPPNNQSPPRFPRFLYSLEISEAVRIGATLLSLQATDRERDVITYSIQNGDPHHLFE LSQMSGLLVLRKPLDRETEDHYTLVVTASDGRPEGTSTATVNIVVTDVNDNDPVFDLLLP QNLTVKEEEANCFVGQVKATDPDAGVNGQVCYRLVNHADLFRINSNGTISTAVPLDREVR GQYDLIVEAEDGAVEDPRRTTLTLSVTVLNVDDNSPVFSQPSYTVNLPENSPKNTVILQF TAKDADLDSNITFRIRTQEARQLFAVNPVTGELSVLQTLDFETLAASDHTYTFVVEALDN EESMPPGRATVTVKIMDMNDYSPVFSQVVYRGMVAPNAVKGTVVATVQAEDLDPPGTPAS RVRYRLDLNEEPYSGSIFDVDEVTGSVITRVNLNEEPNLVFSLVIVAYDDGEPMKVNKTL VVITVLQPSIIPVFTQEEYRFPPVSEKAKVGKLVGVILAAAVNQTIVYSIAEGNEGGVFR LNNDTGVISTAKPLDYEANGSYSLRVEADSMGLAESNLRAPSKTNTARVFIDVLDENDHS PVFTKPLYLGGVAEDAKTFTSVLQVQALDKDTGNYSSMQYRLVIPPTTNGKDGFVIEPYT GVIKTAIMYRNMRRSYFKFEVVATDNYGQGGLSNKAEVVVSVVNLLDMQVVVSNVAPTVV EQNKDKLLGVLERYVQDQIPGAKVVVESIGPRRFGDGFEQEDYSKSDLMVYAVDPLTNRA ISRQELFKFLDGKLLDINKEFQPYLGRGGRILEIRSPDVVTSVKKAMQTVGYTEGALLAL AVIIILCCIPAILIVIITYRQRQAECAKTARIQMTLPTGKSVVAATNNLYEELGDNTMRG YGHHEQQQLLRPSLLRPEELSIESGIDPGQDYYTQDYYNCDHGYELPQYGSRRKLISPTG LYDEYGEVIVEDDGSYYYCSPQESDGEYGRKKRIKLVVDREYETSSTGEDSAPEPQRNRL SNLTNHSHVNGSVYLAQNGSVIRTRRAAHSNNIKVNSPVRLGKHFKKLDKLAVTHEERLP LNSPVATTSSADKNLNTQPSSGSLASSTTGAESIASKSNIAKARSERTWDAEEQESTVDN EDVREPLESQSDRTYSDEEELWMGPWNNLHIPMTKL NT seq 5151 nt NT seq  +upstreamnt  +downstreamnt atgcagaggaggtcatggcacttcaaatggttagggataggacttctgctgttagctact tgttgcctgtctcaagacacagatgaatgcaaactctccagaactggtccacccgccacc attgttgccatagatgaagagagccccaatggaacacttttggttgagaatatgcaaatc caaggccgagtggaagacccaggcagaaccatctctctctccctccgagacaactacaac cactgggtcatactggacccggtcagacaaaggctgtacctcaacagcaccggcagggcc ctcgaccgagaccccccgtcctacatccattccatcgttgtccaggtccagtgcaccaat gagctggtcgggaccgtcattttacacgaggtgcgcattgtggtgagggatcgcaatgac aacgcaccccgattccagcagcctcgctactatgtcgccataaatgagttgaccccagtt ggcaccaccatcttctccggcttcactgggaataatggagccctggacattgatgacggc cctaacggacagattgaatacatcatccagtacaacccaactgacccggcggccaacagg acgtttgacatccctctcaccctctccggctcggtggtcctgagggagaggctcaactac gaggaaatcacccgctacctggttctcatccaggccaatgatcgcgccccgtaccccaac gaacggcgcactgccaccaccaccctgactgtagacgtgctggacggggatgacctgggg cctatgttcctgccctgctctctggtcgacaacacacgtgactgcagccctctcacctac cgggtccacatcctggagctcactgacccaagcaaagtgaaccctgtcaacgtgactccc gtcattcaggccgtggaccaggacaggaacatccagcctccgtcacagaggccaggcatc ctctactccatcctcattggcaagcctgagacgtacgtcgacttcttctccctgaacaga accaccgccgagctgcagctcctcaaaccgctcatcaggggcctgtacaatagatttgac ttggtaatcaaggcagagcaggacaacggccaccccctgcctgcatttgctaacctccac atcgaggttctggatgagaacaaccagtcaccattcttcctggaggccacataccagggc ttcatcaccgagtcagcaccagtgggtaccacagtgttcaccgacgccagcctcaccacc cctctggggatcaacgttctggacaacgacattgaggagacgaaagatcccatgctgcag atatccttggacaactacaacacaatcttcacagtgacaccttcagggattacccgctac ctgacactgctgaagcccgtggaccgtgaagagcagcacagctacacgttcacaatggtg gcttctgatggagttcaggagagtactccagtggccattaatatcacagtgatcgatgcc aatgacaacacaccaacctttccgaacacctcctacagtgtcaatgtttacacagatatg cagcctggggaaacaatattacagctgactgctctggatgctgacgggggtcccaatggg cttgtgacctacaagatcctggcgggggatcaaggacacttcatcatcaataaccgctcg ggagtgatcaccgtggtgcctggcgtctccctggccgtgggacgttcctacacgctgacc gtgaaggctgtggatagtggtccggggtcccagaggaggagctccatcaccaccgtgtac attgaggtgctcccccccaacaaccagagccccccacgctttccccgcttcctctacagc ttggagatcagcgaggcagtgaggatcggagccacactcctcagcctgcaggcaacggac cgtgaaagagacgtcatcacctacagcatccagaacggggatccccaccacctctttgag ctctcgcagatgtcagggctgttggtcctgaggaaaccactggacagggagacagaggat cactacaccctcgttgtaactgcctcagatggccgtccagaagggacctccacggccact gtgaatattgtggtcactgatgtcaacgataatgaccctgtcttcgatctgctcctgccc caaaacctaaccgttaaagaggaggaggccaactgttttgtgggtcaagtaaaggccaca gatccagacgcgggggttaatggccaggtgtgctaccgactggtcaatcacgccgacctc ttcaggatcaactccaacggcaccatctccaccgcagtgcctttggatcgagaggtcagg ggtcagtatgacctcattgtggaggcggaggacggagcggtggaggaccccagaaggacc acactgactctgtcggtgactgtgctgaatgtggatgataacagtccggtgttctcacaa ccatcctatacggtcaatctgccggagaatagtcctaagaacacagtcatcctgcagttt accgccaaagacgctgacctggattccaacatcaccttccgtatccggacgcaagaggcc agacaactttttgccgtcaacccagtgactggagagctctctgtgctgcagacgctagac tttgagaccctggcagcctcggaccatacctacaccttcgtggtggaagccctggacaat gaagagagcatgcccccaggccgggccactgtcactgtaaagataatggatatgaatgac tactctccagtgttcagccaggtggtgtacaggggcatggtagctcccaacgcagtcaag gggaccgtggtcgccacggtgcaggcagaggacctagaccctcctggcacccctgccagc cgtgtgcgttacagactggacctgaatgaggaaccttacagtggcagcatctttgacgtg gatgaagtcacaggcagcgtcatcacacgagtcaacctcaatgaagagcccaatctagtg tttagcctggttattgttgcctatgacgacggggagccaatgaaagttaacaagaccctg gtggttatcactgtcctgcaaccctccatcataccagttttcacccaggaggaatacaga tttccccctgtgagtgagaaggctaaggtggggaagctagtcggtgtcatattggctgca gctgtcaatcaaacgattgtctattccatagcggagggcaacgagggaggtgtgttcagg ctcaacaacgacaccggggtgatctcaacggccaagcccctggactatgaggccaatggc agctacagcctcagagtggaggctgactccatggggttggccgagtccaacctccgagcg ccctccaagactaacacagcgagggtgttcattgatgttctggatgagaatgatcactct cctgtctttaccaaacccttgtacctgggaggagtggccgaggacgccaagacattcact tccgtactacaagtccaggccctggacaaggacacagggaattacagctccatgcagtac aggctcgttatccctcccaccaccaacggcaaggacggctttgtcatcgagccctacact ggtgtcatcaagactgccattatgtacaggaacatgcgccggtcttacttcaagttcgaa gtggtcgccactgacaattacggccaggggggattgagcaacaaggcagaggtggtggta tccgtggtgaatctgctggatatgcaggtggtggtgtccaacgttgctcctacagtggtg gaacagaacaaggacaagctcctcggggtcctggagcgctatgtgcaggaccagattcca ggggccaaagtggtggtggagtccataggaccgcgacggtttggcgacggcttcgagcaa gaggactactccaagtcagacctgatggtgtatgctgttgaccctctgaccaacagggcc atttcacgccaagagctgttcaagtttctggacgggaagctgctggacatcaacaaggag ttccagccgtacctgggccgaggagggaggatcctggagatacgctcccctgacgtggtg accagcgtgaagaaggccatgcagaccgtgggctacacagagggggcgctgctcgccctc gccgtcatcatcatcctctgctgcatccccgccatcctcatcgtcatcatcacctacagg cagagacaggcggagtgtgctaaaactgcccggatacaaatgaccctccctactggcaaa tcagtggttgctgccaccaacaacctgtatgaagagctgggggacaacaccatgcgcggg tatggacatcatgagcaacagcagttgctcaggccctctcttctgagaccggaggagctc tctattgagtctggtatcgatcctggccaggactattacacccaggattattataattgt gaccatgggtatgagctgcctcagtatggcagtcgcaggaagttgatatctccgacaggc ttgtatgatgagtacggagaggtgattgtggaagacgatgggagctactactattgcagt ccacaggagtcggatggagagtacgggaggaagaagcggatcaagctggtggtggacagg gagtatgagaccagttccacgggggaggacagtgctccggagccccaaaggaaccggctg tccaatctgaccaaccacagccacgtcaacggcagcgtgtacctggcacagaacggctcg gtcatacgcacccgccgggccgcccactcaaacaacataaaggtcaactccccagtgcgc ctgggcaagcactttaagaaactagacaaactggcagtgactcacgaggagagactgccg ctcaacagccccgtggcgaccacgtcctcggccgacaagaacctaaacacccagccctcc agcggctccctggcctccagcaccacgggagccgagagcattgcgtccaagtccaacatc gccaaggccaggagcgagagaacgtgggacgcggaggagcaggagtcaacagtggacaat gaggatgtgagagaacctttagaatctcagagcgatcgcacgtattccgatgaggaggag ctatggatggggccctggaacaatctgcacataccaatgacaaaactgtga

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