KEGG   Oncorhynchus keta (chum salmon): 118363499
Entry
118363499         CDS       T09424                                 
Name
(RefSeq) GTP-binding nuclear protein Ran isoform X1
  KO
K07936  GTP-binding nuclear protein Ran
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03008  Ribosome biogenesis in eukaryotes
oke03013  Nucleocytoplasmic transport
oke03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118363499
   03008 Ribosome biogenesis in eukaryotes
    118363499
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118363499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118363499
   03009 Ribosome biogenesis [BR:oke03009]
    118363499
   03016 Transfer RNA biogenesis [BR:oke03016]
    118363499
   03036 Chromosome and associated proteins [BR:oke03036]
    118363499
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118363499
   04031 GTP-binding proteins [BR:oke04031]
    118363499
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     118363499
Ribosome biogenesis [BR:oke03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    118363499
  Pre-60S particles
    118363499
Transfer RNA biogenesis [BR:oke03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    118363499
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     118363499
   Spindle formation proteins
    118363499
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118363499
GTP-binding proteins [BR:oke04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    118363499
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU G-alpha RNA_helicase AAA_24 Gtr1_RagA Pox_A32 ArgoMid AAA_7 Septin TsaE AAA_16 AAA_22
Other DBs
NCBI-GeneID: 118363499
NCBI-ProteinID: XP_052344321
LinkDB
Position
30:complement(37336056..37340051)
AA seq 253 aa
MSGNGLRSSLNLPRTQPFTLFRFVSTPGEHKKPTTHSTMAEGEPQVQFKLVLVGDGGTGK
TTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQA
QCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKN
LQYYDISAKSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEILMDPSLAAQYEHDLKV
ASETALPDEDDDL
NT seq 762 nt   +upstreamnt  +downstreamnt
atgagcggaaacggactcaggtcgtcgctgaatctcccgcggacgcagccatttactctt
ttccgcttcgtttcaacgccgggagaacataaaaaacccacgacacattccacaatggca
gagggagaaccgcaggtccagttcaagcttgtgttggttggcgatggaggaacgggaaag
accactttcgtcaaaagacatttgacgggagagtttgagaagaaatatgttgccacgctg
ggagtggaggtgcacccgctggtattccacaccaacagaggggccatcaaatataatgtg
tgggacacagccgggcaggagaagtttggagggctccgagatggctactacatccaagcc
cagtgcgcaatcatcatgtttgacgtcacgtcccgagtcacctacaagaatgtacccaac
tggcatcgtgatctggtgcgagtctgtgagaacattcccatagtcctctgcggcaacaag
gtagacatcaaagacaggaaagtcaaagccaagagcatcgtattccatcgcaagaagaac
ctccagtactacgacatctctgccaagagtaattacaactttgagaagcccttcctgtgg
ctagcacggaagctgattggagaccccaacctggagttcgtggccatgcccgctctcgct
ccaccagagatcctcatggacccctccctcgcagcgcagtacgagcatgacctcaaagtt
gcatcagaaacagcgctcccagatgaagatgatgacctttaa

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