Oncorhynchus keta (chum salmon): 118363578
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Entry
118363578 CDS
T09424
Symbol
sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
KO
K14381
sequestosome 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
oke04140
Autophagy - animal
oke04217
Necroptosis
oke04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118363578 (sqstm1)
04137 Mitophagy - animal
118363578 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
118363578 (sqstm1)
04218 Cellular senescence
118363578 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118363578 (sqstm1)
03029 Mitochondrial biogenesis [BR:
oke03029
]
118363578 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118363578 (sqstm1)
Membrane trafficking [BR:
oke04131
]
Autophagy
Mitophagy
Cargo receptors
118363578 (sqstm1)
Pexophagy
118363578 (sqstm1)
Aggrephagy
118363578 (sqstm1)
Xenophagy
118363578 (sqstm1)
ER-phagy
ER-phagy recepters
118363578 (sqstm1)
Other autophagy associated proteins
Midbophagy
118363578 (sqstm1)
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
118363578 (sqstm1)
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118363578 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
118363578
NCBI-ProteinID:
XP_035600455
LinkDB
All DBs
Position
30:complement(47748164..47752320)
Genome browser
AA seq
476 aa
AA seq
DB search
MSMTVKAYLLGKEHMPKEIRRFAVDQDVSTSFEYLNRKVVDVFSTLRNVPYQMFYKDEDG
DMIAFSTDDELIMGLTCIKDDTFRLFIKEKKEHRREFPAFAFPGGVPPFAFPPHPGAPHM
GPPPPHGPPPHGHGPHGPPMVHPNVTCDECEGPVAGTRFKCTVCSNYDLCSPCQAKGLHK
EHVLLPIWHPFNNTFEWFPRGKWMRKMRHCMWAQAQSQAQPGPSGSQPGPSGSQPGPSGS
QPGQAAPEDSQPSSDASSASSQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVEHEGKRT
KVMTPNPTPPGSGGHPGARSDNGTGWSEGAGANDGDMEVDELSSLGSASGLAKGGKDTGG
SGDEEWTHVTSKEVDPSTGELQSLRVGEEGSLEALGSLTPSQGPSQEPLKSLTLAEAAAY
PHLPQDADPRLVESLSQMLSMGFTDEGGWLTRLLHTKDCDVGAALDTIHYSKPPQK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaccgtgaaagcctatcttcttgggaaggaacacatgccgaaagaaattcgt
cgctttgcggtcgaccaagatgtttcaacgagttttgagtatttgaatcgaaaggttgtt
gatgttttctcaacactgcgaaatgtcccctaccaaatgttttacaaagatgaggacggt
gacatgatcgccttctccaccgacgatgagctcatcatgggcctcacctgcatcaaggat
gacaccttccgcctcttcatcaaggagaagaaggagcacaggcgtgagttccctgctttt
gctttcccgggcggtgtccctcctttcgccttcccccctcaccctggagcaccccatatg
gggccccctccaccccatggcccaccacctcatggtcatggccctcacgggccccccatg
gtgcaccccaatgtgacctgtgatgaatgcgagggcccggtggcagggacccgtttcaag
tgcactgtgtgctccaactacgacctatgctccccgtgccaggccaagggactccacaag
gaacacgtcctcctacccatctggcaccccttcaacaacacatttgagtggttccctcgt
gggaagtggatgcggaagatgagacactgcatgtgggctcaggcccaaagccaggcccag
cctggtccctctgggtcccagcctggtccctctgggtcccagccaggtccctctgggtcc
cagccaggccaggcggcccccgaggacagtcagccatcctctgatgcctcatctgcttcc
tcccagcagtcccaggcaaatatggattacctaaagaacattggagaaggggtggcagcc
atgcttagcccactgggtatcgatgtggatattgacgtggagcacgaggggaagaggacc
aaggtgatgacccccaacccgaccccacccgggtcaggaggccaccctggtgctaggagt
gacaacgggacagggtggtctgagggagcaggggcaaacgatggagacatggaggtggac
gagctgagcagcctggggagcgccagtggtttggctaagggtggtaaagacactgggggc
agtggtgacgaggaatggactcacgtgacctccaaggaggtggacccctctactggagag
ctccagtctctcagggtgggtgaggagggctcactggaagccctagggtccctcacccct
tcccagggtccctcacaggaaccactgaagtccctcactctcgctgaggccgcagcctac
ccccacttgcctcaagatgcagacccacgcctggtggagtcgctgtcccagatgctgtcc
atgggcttcacagacgagggtggctggctcacccgtcttctccacaccaaggactgcgac
gttggggctgccctggacaccattcactactccaaacccccccagaagtaa
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