Oncorhynchus keta (chum salmon): 118363616
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Entry
118363616 CDS
T09424
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118363616
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118363616
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
118363616
NCBI-ProteinID:
XP_035600566
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All DBs
Position
30:complement(42070988..42164387)
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AA seq
867 aa
AA seq
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MKRAADLELPGQRRMTGAREKGRRPAMRGPAFMFNDHTTSMTAEEERFLDAAEYGNIPVV
RKMLEESTTLNVNCVDYMGQNALQLAVGNEHLEVMELLLRRDNLARIGDALLLAISKGYV
RIVEAILAHPSFQASERLTRSPCELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVH
MLLLKGARIERPHDYFCKCPECTEKQGKDAFSHSRLRINAYRGLASPAYLSLSSEDPVLT
ALELSNELTKLANIEKEFKDKKSHKKETMQHNCFSLNDYRKLSMQCKDFVVGVLDLCRDT
EEVEAILNGDVTAEKEAGKGLRSLLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGL
REQTIVVKCLVVVAVAFGLPLLAMGYWFAPCSRLGNVLRSPFMKFVAHAASFIIFLCLLL
FNASDRFEGIRTMPNVTVTDHPMQIYRVKTTEFSWTEMLIMVWVTGMMWSECKELWTEGP
REYMQQLWNVLDFGMLSIFIAAFTARFFAFLQATRAQQYVNENIHTTDLSLVTLPPEVKY
FTYARDKWLPSDPQLISEGLYAIAVVLSFTRIAYILPANESFGPLQISLGRTVKDIFKFM
VLFIMVFLAFMIGMFILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVSSVVLKYNHK
FIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWLSYFDNGK
TLPPPFSIVPTPKSFYHHIRWIVGMLHCRQRSVKKDLELGLDSSKSRLNLFTQSNLRIAE
SHSILNQPTCYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQ
ATEELSLLIQKLSDKLNLGPTTRLPYK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagggcggcggaccttgagctccccggccagcggcggatgacaggggcgcgggag
aagggtcgtcgaccagcgatgcgtgggccggccttcatgttcaacgaccacaccaccagc
atgaccgccgaggaggagcgctttctggacgccgccgagtatggcaacatccctgtggtc
cgcaagatgctggaggagtccaccacgctcaatgtcaactgtgtggactacatgggccag
aatgcattgcagcttgcggtgggcaatgagcatctggaggtgatggaactgctcttgcgg
agggacaacctggcacgcatcggtgacgccttactcctggctatctcaaaagggtatgtt
aggatcgtggaagccatcttggcccatccatccttccaagccagcgagcggctgacgcgg
agtccgtgtgagctgcaggacgatgacttctactcgtatgacgaggatggcacacgcttc
tcgcccgacatcacccccatcattctggctgcacactgccagaagtacgaggtggtacac
atgctgctgttgaagggcgctcgcattgagcggccacatgactacttttgcaagtgccca
gaatgcaccgagaaacagggcaaagacgctttcagccactcacgtttgcgcatcaatgcc
taccggggcctggctagcccggcatacctttcactgtctagcgaggacccggtgctcacc
gcgctggagctcagcaatgaactgaccaagttggccaacatcgagaaggagttcaaggat
aaaaagagccataaaaaagagaccatgcagcacaattgcttctccctgaatgactatcgg
aagctgtctatgcagtgtaaggactttgtagtgggagtgctggacctctgtcgggacacg
gaggaagtggaagccattttgaatggagatgttactgctgagaaggaggcggggaagggc
cttcgctctctcctgagcagggtcaaactggccatcaagtacgaggtgaaaaagtttgtg
gcccaccccaactgccagcagcagctgctgacgatctggtatgagaacctgtcgggcctg
agggagcagaccatcgttgtgaagtgcctggtggtggtggcggtggcctttggtctgccc
ctactggccatgggctactggttcgctccctgcagtcggctgggaaatgtcctgcgcagc
cccttcatgaagtttgtggcccatgccgcctccttcatcatcttcctgtgcctgctgttg
ttcaacgcatcggaccgcttcgagggaatccgcaccatgccaaacgtgaccgtcactgac
caccccatgcagatctaccgggtcaagaccaccgaattcagctggaccgagatgctcatc
atggtctgggtcacagggatgatgtggtcggagtgtaaggagctgtggaccgaggggccc
agggagtacatgcagcagctgtggaacgttctggacttcggcatgctttccatcttcatt
gccgctttcaccgctcggttctttgccttcctccaggccaccagagcccagcagtacgtc
aacgaaaatatccacaccaccgacctctccctagtgaccctaccgccggaggtcaaatac
tttacctacgcaagggacaagtggctgccgtcagacccccagctgatctcagaagggctg
tatgccatcgctgtggtactgagcttcacacgcatcgcttacattctgccggctaatgag
agctttggaccactccagatctccctgggccgcacggtcaaagacatcttcaagttcatg
gtcctgttcatcatggtcttcctggcgttcatgatcggcatgttcatcctctattcttac
tacttgggtgccaaggtcaacccggccttcaccactgtggaggagagcttcaagactctg
ttctggtctatatttggactgtccgaggtgtcctctgtggtgctcaagtacaaccacaag
ttcatcgagaacatcggctatgtgctctatggaatctacaacgtgaccatggtggtggtg
ttgctcaacatgctgatcgccatgatcaacagctcctatcaagaaatcgaggacgatgcg
gacgtggagtggaagtttgcacgctccaagctatggctgtcgtactttgacaacggcaag
acactgcctcctcccttcagcatcgttcccactcccaagtccttctaccaccacatcagg
tggatagtcggcatgctgcattgccgacaaaggagtgtgaagaaggatctagagctgggg
ttggacagttcaaagtccaggctcaatctcttcacccagtccaacctacgcattgcagag
tcccacagcattctgaaccaacccacctgctatcagcaaatcatgaagcgactcatcaaa
cgctacgttttgaaagcacaagtggacaaagaaaacgacgaggtcaatgaaggtgaactg
aaagaaatcaagcaggacatctccagtttacgttacgaactcctggaagacaagtctcag
gctacagaggagctgtccttgcttatccagaaactgagtgacaaactgaacctaggccct
actacacgcttgccctacaagtga
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