Oncorhynchus keta (chum salmon): 118364554
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Entry
118364554 CDS
T09424
Symbol
si:ch73-22o12.1
Name
(RefSeq) poliovirus receptor isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03266
Virion - Herpesvirus
oke04514
Cell adhesion molecules
oke04520
Adherens junction
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
118364554 (si:ch73-22o12.1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118364554 (si:ch73-22o12.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118364554 (si:ch73-22o12.1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118364554 (si:ch73-22o12.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118364554 (si:ch73-22o12.1)
04090 CD molecules [BR:
oke04090
]
118364554 (si:ch73-22o12.1)
Cell adhesion molecules [BR:
oke04515
]
Immunoglobulin superfamily
Nectin family
118364554 (si:ch73-22o12.1)
CD molecules [BR:
oke04090
]
Proteins
118364554 (si:ch73-22o12.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
ig
V-set
Ig_3
I-set
Ig_2
TM_ErbB1
DUF6338
DUF4342
Aminotran_3
Motif
Other DBs
NCBI-GeneID:
118364554
NCBI-ProteinID:
XP_035602086
LinkDB
All DBs
Position
31:complement(16155961..16249228)
Genome browser
AA seq
534 aa
AA seq
DB search
MAREDARNRHDFTKIRLFSVVTLLTFQGALSQQVRVEPEVMSYPSQAVNLRCAFADAGGI
QLTQVSWIYEPKEGERLNIAVYHPKFGASFPTSPLKGRVRFTTEPPSLSNPSIQISDVKM
SDEGKYICEYATYPSGNEQGVTSLVMLAKPRNSASGVTVIASTVATGAKPVVVARCESAD
GRPAAQIAWVTAVNGNATSTSTAGADNTVTVSSQYMLVPTAADNGKDISCLVSHRTQAKP
ESFLMKLAIEYPPQVTIVGYDNNWYMGRTNVALTCQATANPIPTTITWKTMSGQMPDTVQ
VKENVLTVLKVDEQANTTFVCEVKNRLGTGKDQVTVMVREPSVVSSNAGVVAGAVIGSLL
ALLLVAALIAVLVTRSRRQQQGYRGNPNHSSYDIKSRVFGGGKKGSKNGTGAGAGGNGAG
GNNSPIYVYKEGSAHDGLTEKANQHVPLHLGRHGEGGVATAQDILLSGELDEAERRKFDQ
LEDDEESYDHFGRGGPILQLRPTHDQDGIMGGYLDDDMESQRDGSVISRTAVYV
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagaggacgctcggaataggcatgacttcacaaaaatcagactgttcagcgtg
gtcacgttgctgacttttcaaggggcattgtctcagcaggtgagagtggaaccggaagtg
atgtcctaccccagccaggcggtcaacctgaggtgtgccttcgcagatgctggagggata
cagctcacacaggtgtcctggatctatgagccgaaggagggcgagcggctcaacatcgcc
gtgtaccaccctaaatttggggcaagtttccccacgtcgcccctgaaggggcgggtccgc
ttcacgacagagcccccctccctcagcaacccctccatccagatctcagacgtcaagatg
agtgacgaggggaaatacatctgtgaatacgccacctaccccagtggcaacgaacagggt
gtcacctccctcgtcatgctagccaaacccaggaactctgcctccggggtaacagtgata
gcctccactgtcgccacgggagccaagccagttgttgtggcccgctgtgagtcggccgac
ggtcgccctgctgcccagatcgcatgggtgacagctgtcaacggcaacgctacctccacc
tctacggcgggcgctgacaacaccgtgacggtatccagccagtacatgctggttcccaca
gcagcagacaacggcaaagacatcagctgtttggtgtcccatcgaacccaggccaagcct
gagagcttcctgatgaaactggccatcgaataccccccacaggtgaccatcgtgggctat
gataataactggtacatgggtcggaccaacgtggctctgacctgtcaggctactgccaac
cccattcctaccaccatcacatggaaaactatgtccggtcagatgccagacacagtgcag
gtaaaagaaaacgtgctgaccgtgctgaaggtggatgagcaggccaacacaaccttcgtc
tgcgaggtcaagaaccgcttgggcaccggcaaggaccaggtcactgttatggtccgagaa
ccctctgtggtctcctccaacgcaggcgtggtggcaggtgctgtgattggctcccttctg
gcccttctccttgttgccgcccttattgccgtcctggtcacccgaagccgccggcaacag
cagggttaccgcggcaacccaaaccacagctcctacgacataaagtcgcgcgtcttcggt
ggcggcaagaaggggagcaagaacgggacgggtgctggcgccgggggcaacggggcgggc
ggcaacaacagccccatctacgtctacaaggagggctccgcccatgatggcctgactgaa
aaggccaatcaacacgtgccgctacacctggggaggcatggtgaagggggggttgccacg
gcgcaggacatcctgttgagcggcgagctggacgaggcagagcggagaaagtttgaccaa
ctggaggatgacgaggagagttacgaccactttggaaggggcgggcccatcctgcagctc
cgcccaacacatgaccaggacggaatcatgggtggttaccttgacgacgacatggagtct
cagcgcgacgggtcggtcatctcacggactgccgtgtacgtgtag
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