Oncorhynchus keta (chum salmon): 118364750
Help
Entry
118364750 CDS
T09424
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03440
Homologous recombination
oke03460
Fanconi anemia pathway
oke04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118364750
09124 Replication and repair
03440 Homologous recombination
118364750
03460 Fanconi anemia pathway
118364750
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118364750
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118364750
03036 Chromosome and associated proteins [BR:
oke03036
]
118364750
03400 DNA repair and recombination proteins [BR:
oke03400
]
118364750
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118364750
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118364750
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118364750
Multi subunit type E3
BRCC complex
118364750
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
118364750
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
118364750
BRCA1-A complex
118364750
BRCA1-B complex
118364750
BRCA1-C complex
118364750
BRCA complex
118364750
FA (Fanconi anemia) pathway
Downstream FA components
118364750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
zf-RING_5
PTCB-BRCT
RTT107_BRCT_5
zf-ANAPC11
zf-MIZ
zf-RING_4
U-box
TRAF3_RING
zf-RING_10
YicC-like_C
zf-rbx1
YafT
Motif
Other DBs
NCBI-GeneID:
118364750
NCBI-ProteinID:
XP_035602344
LinkDB
All DBs
Position
3:8015750..8065562
Genome browser
AA seq
1558 aa
AA seq
DB search
MNTMMSPKAEDVRQGISVICEILQCPICLELMSTPVSTKCDHQFCKFCIMKLLDSSRRKE
ANCPVCKTKITKRSLQESPGFQKLAEGLQNMVQAYEHDTCTNYFTGMSQVRRHMSVTETV
QKKNGHDVSSDDVWASDRADDEDHEFSMSCSSTIAAKDGFATLMGLEDSCPVISDEGFDS
SLGDIPPATEKHTGDSKATSTTEKQKPALEAEIPEVVERAPSRPQKLGKKITTHPQDPPC
CPEKVRNQPVRRSTRNNKRESLTEMIDQNQKKSLEKVSEWLMNNSSTEVNSEKEKNTEGS
YDSVSLAGSCSPSSPLEDNLINKDQSPKREERGKCLEELVFGAVYKRDRRGNRSFSPQNI
VITDPPPPCPAEELQILKKIAKRRMRNKLTPADFVKRPRSEENEESVMDDQPEMTEPQED
SPNEHPKDTEEDKLIDLTGELNSNSSDKQGEELPEGDNKENEDVEDSPVFDVPLREPGRK
SNKKMHGRWQDVDGDLQGKVKSENNEQKKPAKKKGENIKVEKSKATKSLVLVGVGEGGSD
SKMPKSRPSGQTEVQIESYPSSEDPGSPIMRRTRRSRRLQLFTEEVQGSKIGTATSTKVV
VLDLDCNEMQQSKEAKADTDRDNVACLQNQNTEKAVRKNGCVLDEEMGGIESLDSSEKIL
CEMIESQKVNQVEESIVEVPSTGSPCHADVACSVTMVPSSISTPEASVSCAVPESVNQSN
TVIKPLDDLRSNVPQETSASQAKCIDLDEDVRNDSELDTEQLLKSFKATKRKSFHLGSPN
IKRSSFWSNKEITTLTKTQENKHVGTDMEAGNGQGFSRTTECPTVQQEFEKGTIFENSCS
SDLSPPSSSLSNISQEKAQRNRKRLRKSILTRPPQDLVDSLNPDTSGKTQKQILSRLSGN
SSNSALSPNKVTKSQMESSHQAVGSGLLFPAFGASKEDLPDPTPVASKQLRVPKSQQPYK
VEGSMSKSPTELESSHSVGSETAVELNKTCSENMTGNMANTESSLTPDGLLPIIQSVVIQ
EVQRTKRCGVVSLHSPIKSTLKRRKAQRLESSSESNCSGEEEELPSLAQIFRPSTCPPTA
EEEEESVTLLKDHAREQGSYRDAGDAAEDGQRASSPPMCPSPEWVTTSQASVDLFGTPEE
AEGMAGDTGLTQESSQFSSECIATQQKVAMQEELRRLERMMALVSEALQEKEEEEPTGAK
VYPGAPYPPVLLQPDRSTVSSGLDLQVTLPCGQGTRRRSASREGAQNIGGNAASPPPGLG
DCEGLGPTPTTPCRTKHEGPGGTGAGRLGRQSGRSLRSSMRARPNQVSPVVRVHSGTNAP
SAGLEVQDTPVVIQPANTHPSTHTPLREPARVKLVLVVSGLSAPEQSMVKKFAKRMGGSV
CSQVTSETTHVIMNTDGDLVCERTLKYFLGIAGRKWVVSVQWISECFKQGTVLNETSFEV
RGDVVNGHDHQGPMRARTTGDTSLLMKDYEICFQGPFTDMTTGQMEWMVELCGATVVQEP
LLFTGELKTHQLIVVQPGSDQSPINYQALQRIATVITRGWVFDSVATYTLQSLDDYRT
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccatgatgtccccgaaggctgaagatgtcagacaggggatctctgtcatctgt
gagatcttgcagtgtccaatatgtttggaattgatgagcacacctgtgtctactaagtgt
gaccaccagttttgcaagttttgtataatgaagcttttggacagcagtaggagaaaggag
gccaactgtccagtttgtaagacaaagatcacaaaaaggagtttgcaggagagccctggg
ttccagaaattggccgagggattgcagaatatggtccaggcctatgaacatgacacctgc
acaaactacttcactggaatgtcccaggtgaggagacatatgagtgtcacagagactgtg
cagaagaaaaacggccatgatgtctcatctgatgacgtgtgggctagtgaccgtgctgat
gacgaggatcatgagttttcaatgtcctgctcgtcaactatagcagccaaggatggcttt
gcaacgctcatgggtcttgaagattcttgccctgtcatttcggacgaggggtttgacagc
agcctaggtgacatacctccagccactgaaaagcataccggtgactctaaagctacctcc
accacagaaaaacagaagccagcattagaggcagaaatacctgaggttgttgaaagagct
ccttcacgacctcaaaagcttggaaaaaagataaccactcatcctcaagatccaccatgc
tgtcctgaaaaggtcagaaaccaacctgtcagacgatccacgaggaataacaaaagggag
tccttgaccgaaatgattgaccagaatcagaagaaaagtctagagaaagtctctgagtgg
ctcatgaataattcctcaacggaagtaaactctgagaaggagaaaaacacagagggctct
tatgactcagtttctttggcaggaagttgttccccctcctcacccttagaggataacctc
ataaataaggaccagagtccaaagagagaagagcgtggcaaatgtcttgaggagctagta
tttggggctgtttacaaacgggatcgaagagggaaccgcagtttttcaccacagaatata
gtgatcacagaccctccaccaccctgtccagctgaggaactccagattctgaagaagatt
gccaaaaggaggatgagaaataaactgacacctgctgactttgtcaagagaccaagatct
gaggagaatgaagagagtgttatggatgaccaaccagagatgacagaaccacaagaggat
tctcccaatgaacacccaaaagatactgaagaagataagttgattgacctgactggggag
ctgaattctaatagctctgacaagcaaggagaagagttgccggaaggtgacaacaaagag
aatgaagatgtagaggacagtcctgtgtttgatgtgccactacgggaacctgggaggaag
tcaaataaaaagatgcacggtaggtggcaggacgttgacggggatttacaagggaaagta
aagtcggagaataatgagcaaaaaaagcctgccaagaaaaaaggggaaaacatcaaggtg
gagaagagcaaggcaaccaaatccttagtccttgtgggtgtcggagagggtggaagtgac
tctaagatgcctaagagcagaccgtcaggccagaccgaggttcagattgagagttaccct
agcagtgaggatccaggaagcccaatcatgaggagaaccaggaggagtcggaggcttcag
cttttcacagaggaagtacaagggagtaagatcggcactgcaacatccacaaaggttgtc
gttcttgatttagactgcaacgagatgcagcaatcaaaggaggcgaaagctgacaccgac
agggataatgtggcgtgtttgcagaaccaaaatacagaaaaggctgtcaggaaaaacgga
tgtgttttagatgaagaaatgggaggtatcgagagcttggactctagcgagaaaatattg
tgtgaaatgattgagtcacagaaagtgaaccaagttgaggagtctattgtcgaagtccca
agtacaggaagtccttgtcacgctgatgttgcttgttcagtgactatggtaccaagttca
attagtacccctgaggcaagtgtctcatgtgccgtgcctgagagtgtaaaccaaagtaat
acggttatcaaaccattagatgacttgagatcaaatgtaccacaagagacgtcagccagc
caggccaaatgcattgatctggatgaggatgtccggaatgacagtgagctggacactgag
caactgctgaagagcttcaaagccaccaaaaggaagtcgttccaccttggtagtccaaat
atcaagaggagttccttctggtccaacaaggagattacaactcttacaaagactcaagag
aacaaacatgttggcacagatatggaagcaggaaatgggcagggattttcaaggacaacg
gagtgtcccacagtccaacaggaatttgagaaagggacaatattcgaaaattcttgctct
agtgatttgagcccaccttcaagttccctcagcaatatttcacaagaaaaggcgcagagg
aatcgtaaaaggctcagaaaatccattcttaccagaccacctcaggatttagtggattct
ttgaaccctgataccagtgggaagacccagaaacagattctgtccaggctttctggcaac
agctcaaacagtgccctcagtcctaacaaagtcacaaaaagccaaatggaatcttcccac
caagctgtgggttctggtctgctctttccagcttttggcgcctctaaggaagatctacca
gatccgacacctgtagcttcaaagcaacttagagtccctaaaagtcagcagccatacaaa
gtggagggcagcatgagtaaaagtccaacagaactggagagtagccacagtgttggatca
gagacggcagtggagttaaacaaaacgtgttcagagaacatgactggaaacatggcgaat
acagagtcctccttgactccagatggcctccttccaattatccaatcagtagttatccaa
gaggtgcagaggactaaaagatgtggtgtggtcagcttgcactctcccatcaagagcacc
ctaaagcggaggaaggctcagagactggagtcttcctcggagtccaactgcagtggggag
gaagaggaactgccttcccttgcgcaaattttcagaccttcgacttgtccaccaaccgct
gaggaggaggaggaatcagtcacattgctcaaagaccatgccagggaacaaggaagctac
agggatgctggtgatgcagctgaagatgggcagcgagcgagcagtcctcccatgtgcccc
agtcccgaatgggtcaccaccagccaggcatctgtggatctgtttggtacaccagaagaa
gctgaaggaatggcaggtgacactggcctgacacaggaatcatcacaattttcaagcgag
tgtattgccactcagcaaaaggttgcgatgcaggaggagctgcggaggctggagagaatg
atggcgttggtgtctgaagcgctccaggagaaggaggaggaggagcccactggggccaaa
gtctaccccggggccccatatcccccagtgctgcttcaaccagacaggtccacagtctcc
tcaggccttgatctccaggtgaccctgccgtgtggccagggcaccaggaggagatctgcc
agcagggaaggtgcccaaaacattgggggaaatgcagcctcacctccccctggtcttgga
gactgtgagggccttgggcccacccccaccacgccctgccgcactaaacatgagggacct
ggagggactggagcagggcggcttggcagacagtcaggacggagcctaaggagcagcatg
agagcgaggcccaaccaggtgtcgccagtggtcagagtgcacagcgggaccaatgctccc
tcagctgggctggaggtccaggataccccggtggtcatccagcctgccaacacccaccca
tcaacacacactccactgcgggaacccgctagggtcaagttggtgctggtagtatcagga
ctcagtgcacctgaacagtcgatggtgaaaaagtttgccaagaggatgggaggtagtgtg
tgttcacaagtgacgtccgagaccacccatgtcatcatgaacacagatggtgatctggtg
tgtgagcgcacgctcaagtacttcctgggcatcgcaggcaggaagtgggtggtgagcgtc
cagtggatttccgagtgtttcaaacaagggacagtcttaaatgagacgtcatttgaggtg
cgaggagacgttgtgaacggacatgatcaccaagggcccatgagagcacggaccacaggg
gacacaagtctgctgatgaaggattacgagatctgtttccaaggccctttcaccgatatg
accactggtcagatggagtggatggtggagctttgcggcgcaacagtggttcaagagcct
cttctcttcactggtgaactgaaaactcatcagctaatagtggtacaaccaggctcggac
caatcaccaataaactaccaagccctccagaggatagccacggtcatcacccgtggttgg
gtatttgattccgtggcaacctacacccttcaaagcctcgacgactacagaacgtaa
DBGET
integrated database retrieval system
