Oncorhynchus keta (chum salmon): 118365071
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Entry
118365071 CDS
T09424
Symbol
traf5
Name
(RefSeq) TNF receptor-associated factor 5 isoform X1
KO
K09849
TNF receptor-associated factor 5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04217
Necroptosis
oke04621
NOD-like receptor signaling pathway
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
118365071 (traf5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118365071 (traf5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118365071 (traf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118365071 (traf5)
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
118365071 (traf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-TRAF_2
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
ATG16
EzrA
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
NPV_P10
DUF948
Spt20_SEP
Laminin_II
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
118365071
NCBI-ProteinID:
XP_035602882
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All DBs
Position
32:complement(13959025..13969799)
Genome browser
AA seq
599 aa
AA seq
DB search
MNVDVNYKSKPRTSSHIPFLKTRLQIAMATKESDPSGSGGLSRQNSGVVGPWELDLTAVQ
HSLKFVKKLEEHYVCPTCKGVVLNPHQTGCGHIFCYSCIQGLLENSPATTPACPLDRGLI
KSDEVFQDNCCKREISNLEVYCTNSPNCSHRMTLCRLQEHLQACQFESLQCSNAGCSETM
QRKDLQEHLRISCSYRMEPCHYCKHPYTCCQLEDHERHSCPEVEIKCPNKCSQMIKRCML
EDHADQCPEVQTDCVFKKYGCFVRERRAQVQVHEETALNDHILLVLGSNTKLETQMAILQ
QEVLLRHKELQERSRQVSGLEKEVHPLAQQVSRCDNTLSAVQRSLEEQQDHISSVQLQLE
ELSSVFGPGVAREELGQIRASLDALRQQVSVTEGLKDHLGELKETYMRHSRLLSIHTAQL
ECNEEHFRELESTSYDGKLIWKLRDYRKRKEAGSQGQGPCLSSAPFHTGRSGYKMAARAY
LNGDGAGRDTHLSLYVVLMRGDFDPLLPWPFRQPVSLSVLDQSGTNNHLTMSFKPDPENT
SFHRPGSAAATANAPTNVASGFQCFASHAQLETPKNAIYVRDDTLFVKVKVDTSGLEDL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggatgtaaattacaaaagtaaaccaagaacatcgtcgcacattccgttttta
aagacacgcctacagattgccatggcaacaaaggagagtgacccgagtggatccggagga
ctctccaggcagaattcgggagtggtgggaccgtgggaattggacttgactgcagtgcag
cacagtttgaagtttgtgaagaagctggaagagcactatgtttgtcccacctgtaaagga
gtagttctcaacccacaccaaactggctgtggacacatcttctgctacagctgcatccaa
gggctcctggaaaactccccagccaccacccctgcctgtcctttggacagaggtttgatc
aaatctgatgaggttttccaagacaattgctgcaaaagggagatctcaaatttagaagtt
tactgcacaaactctcccaactgctcccacagaatgacattatgtcggttgcaggagcat
ctacaggcatgtcagtttgagtcattgcagtgttccaatgcaggctgcagtgagaccatg
caacgtaaggacctgcaggagcacctcagaatcagctgctcctaccgtatggagccctgt
cactactgcaagcatccttacacatgctgccagctcgaggatcatgagaggcattcatgc
ccagaggttgaaatcaagtgccccaacaaatgctcccagatgattaaaagatgcatgctt
gaagaccatgctgaccagtgtcctgaggtgcagacggactgtgtttttaagaaatatggc
tgctttgtccgggagaggagagcccaagttcaagttcatgaggaaactgctctcaatgac
catatcctcctggttctggggagcaacacaaagctggagacacagatggcaatcctccag
caggaggtgctgctgaggcacaaggagctccaggagaggagccgccaggtcagcggtctg
gagaaggaggtccacccactggcccagcaggtcagccgatgtgacaacaccctgtctgca
gtacagaggtctctggaggagcagcaggatcacatctccagcgtccagctccagctcgag
gagctgtccagtgtgtttggccctggtgtggcccgggaggaactgggccaaatcagagcg
tccctggacgccctcagacagcaggtgtccgtcacggaggggctcaaagaccatctgggg
gagttgaaggagacctacatgcgccactcacgcctcctcagcatccatacggcgcagctg
gagtgcaacgaggagcacttcagagagctcgagtccacctcgtacgacggcaagctcatc
tggaagctccgcgactaccgcaagagaaaggaggccgggtctcaaggccagggaccgtgc
ctgagcagcgcgcccttccacacgggccgcagtggctacaaaatggccgccagggcctac
ctgaatggcgacggggccggccgggacacccacctgtctctctacgtggtcctcatgagg
ggcgacttcgaccccctcctgccctggcccttcagacagcctgtgtcattgtcagtgctg
gaccagagcggcaccaacaaccacctgactatgagtttcaaacccgacccagaaaacact
agcttccaccggcccggctcggccgctgcaaccgccaacgcccccaccaatgtggcctct
ggtttccagtgctttgcctcgcatgcccagctggagacacccaagaacgccatatacgtg
agagacgatacgctctttgttaaggtcaaagtagacacgagcggtttggaggacttgtag
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integrated database retrieval system
