Oncorhynchus keta (chum salmon): 118365292
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Entry
118365292 CDS
T09424
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00514
Other types of O-glycan biosynthesis
oke04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118365292
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118365292
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118365292
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
118365292
Glycosyltransferases [BR:
oke01003
]
Glycan extension
O-Glycan
118365292
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
118365292
NCBI-ProteinID:
XP_052374700
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All DBs
Position
5:12733983..12741861
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AA seq
380 aa
AA seq
DB search
MSKSSGKKTVISITSAGFTCLLLLLVVAQHQRVQVDEVPNQREMGTRSLQSTDTLATDGV
KAAQQQVNSEAQAKKGFSAYFSKLTRGRREADKPAGSAQSATDASPAEDISADDIFIAVK
TTKKFHQSRLNLLLDTWISRNMQQTYIFTDGEDEELKKKMGSHAINTNCSAAHSRQALSC
KMAVEYDKFIESGKKWFCHVDDDNYVNTRTLVKLLSHYPHTQDMYIGKPSLDRPIEATER
LGDNKMRPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIES
VLGVPLTRSNFFHSHLENLQQVSRSELHKQITLSYGMFENKRNIINMKGAFPVEEDPSRF
KSVHCLLYPDTPWCPLQVAY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagttctggtaagaaaacggttatctctataaccagtgcaggattcacctgc
cttctgttgctcttggtggtcgcgcagcatcaaagagttcaggtagatgaggttccaaac
cagagagagatggggacgcgctcactccagagcacggacaccttggctacggacggagtg
aaggctgctcagcaacaggtcaactcggaggcgcaggcaaaaaaaggattctctgcgtat
ttttccaagttgacccggggacggagagaggcggacaagcctgcagggtccgctcagtca
gcgacagatgcgtcccccgcagaggacatcagtgcagatgacatcttcatcgctgtcaag
accacaaagaagttccatcagtctcgactgaatctccttctggatacctggatctctaga
aacatgcagcagacatacatcttcacagatggagaagatgaggagttgaagaagaaaatg
gggagtcacgccatcaacaccaactgttcagcagcacacagccgccaagctctatcctgc
aagatggctgtggagtacgacaagttcatagagtctgggaaaaagtggttctgtcacgtg
gatgatgataactacgttaacacgaggactctggtgaagctgctgtcccactacccccac
acccaggacatgtacattggcaagcccagcctggaccggcccatcgaggccacagagagg
ctaggagacaacaagatgcgaccagtaaacttctggtttgctactgggggagccggcttc
tgtgtgagtcgaggcctggctttgaagatgagcccatgggccagtggcggccattttatg
aacacggcagagaagattcgtctgcctgacgactgcaccatcggctacatcatcgagtcg
gtgctgggggtgcctctgacccgcagcaacttcttccactcccatctggagaacctgcag
caggtgtccagatctgaacttcacaaacagatcacattgagttatggaatgtttgagaac
aagaggaacatcatcaatatgaaaggggctttcccagtggaggaagacccatcaaggttt
aagtctgtgcactgtttgctgtacccagacaccccttggtgtccgcttcaggttgcctac
tag
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