KEGG   Oncorhynchus keta (chum salmon): 118365448
Entry
118365448         CDS       T09424                                 
Name
(RefSeq) RING-box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03420  Nucleotide excision repair
oke04110  Cell cycle
oke04114  Oocyte meiosis
oke04120  Ubiquitin mediated proteolysis
oke04141  Protein processing in endoplasmic reticulum
oke04310  Wnt signaling pathway
oke04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    118365448
   04120 Ubiquitin mediated proteolysis
    118365448
  09124 Replication and repair
   03420 Nucleotide excision repair
    118365448
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    118365448
   04350 TGF-beta signaling pathway
    118365448
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    118365448
   04114 Oocyte meiosis
    118365448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oke04121]
    118365448
   03400 DNA repair and recombination proteins [BR:oke03400]
    118365448
Enzymes [BR:oke01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     118365448
Ubiquitin system [BR:oke04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   118365448
  Multi subunit type E3
   SCF complex
    Ring finger protein
     118365448
   Cul2 complex
     118365448
   Cul3 complex
     118365448
   Cul4 complex
     118365448
   Cul7 complex
     118365448
   Cul8 complex
     118365448
   Cul9 complex
     118365448
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      118365448
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      118365448
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 118365448
NCBI-ProteinID: XP_035603566
LinkDB
Position
32:complement(26525465..26529422)
AA seq 108 aa
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgttgataccccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcttggggagtctgcaatcatgcattccat
ttccactgtatctctcgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag

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