Oncorhynchus keta (chum salmon): 118366405
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Entry
118366405 CDS
T09424
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04140
Autophagy - animal
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118366405
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118366405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118366405
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118366405
Membrane trafficking [BR:
oke04131
]
SNARE
SNARE associated proteins
Others
118366405
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
118366405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
118366405
NCBI-ProteinID:
XP_035604946
LinkDB
All DBs
Position
3:12284099..12298586
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AA seq
1065 aa
AA seq
DB search
MLATQTPDTGPEAKDVKQWIKEKLAWSLKVLQKRYVTTDVVVTSEDGDANLLCCALEAIF
IHGIKSKYVRSEAGGRGRKGGSRGALPQPVFWSLLKTVTHGDVITELEKLSFVGTDTGRC
RAWLRLALNHGLMECYLASLFREGSKLQAHYQPSALLLDPEEREVLLSYIQGLASLTFNL
SYKSAVLNEWTTTPLALAGLCPAAQAEALDLPFLTKRKESYDTVSQSSGGSDTVEVQRGG
PGVLGKGIGGVSGFKTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKEPWPCDL
EISNTENNGNAKRPLKDVLADFRESANSSQDSMREDSYVSTPGADHLSENTAFSGSDSET
QGHVTHLTGPSNPASLGSDQEEPSTKTHAPSNVYSHIEGPSSLSDCVESTSTTPHLPATE
TPQEKKTEYSVKSASEPSAHMNLHRTTSVLSRMVSTDSVTHSHSWISEDDIYKPHLEELA
DPDESLLGSGPACVNGFTSPPLEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGTV
GMWRDYYCELSPFEFRLYLNAEERTCCDNCSLLRCEDACVTSAEGRFDLAFPGKRLLMRA
ANCDEAEDWVDRITEAVNKCRPLHLLDDQWEVLQLSDSSVTPDEPPKSSPSSPSSVPASP
NRGGAVVEQVQQLELDWTRPTDPESDAIKEAVLYFCQDSEPRIWTPLVFSLSLETLKGFR
MQDGQKVLRCSHPIEGIRDVVPDVSMGGPAFFRVVTARDTLKLRAKSSEEARAWRDLIRG
ALDSYLESGEDWEPESPGVAPGVGGNTHRLVQHRLKGDGVLLAHLCTVPTEKGLDLQGFK
CAGCSKVIGVSRGKARLCEFSGQYYCDACHQGDTIVIPSRMVHNWDLAPREVSRHALKLL
AQIEHEPLLNLDLLNPDLWEHAEAMAQAQSHRQRLRLLGDYLLTCRSGACKNIQTRLGPR
TYLLESSHLYSVMDLRQIAEGMYVAYLNTLIQFASNHVHHCDLCTQRGFICQICHTSDII
FPFQFDTTTRCKECKAVSHVTCKAKSPSCPRCLRLQRYLERDLQD
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgttagccacacagaccccagatacagggccagaggcaaaagacgtcaagcagtggatt
aaggagaagttggcgtggtcactcaaggtgttgcagaagcgctacgtgacaaccgatgtc
gtggttaccagcgaggatggtgacgccaatctgctgtgctgcgcacttgaggccatcttt
atccacggcatcaaaagcaaatatgttcgctctgaggctgggggacgcggcaggaaaggg
gggtcccggggagccctcccccagcctgtgttctggagcctcctcaagactgtcactcac
ggtgacgtgatcacggagctggagaagctgagcttcgtgggtacggacacgggtcgctgc
cgggcctggctgcggctggccctcaaccacggcctaatggagtgctacctggcctccctg
ttccgtgagggctccaaactgcaggcccactaccagccctccgccctgcttctggaccct
gaggagcgtgaggtgctgctcagttacatccagggcctggcctccctcaccttcaacctc
tcttacaaatcggctgtgctcaacgagtggaccaccacccctctggctcttgctggcctc
tgccctgccgcccaggctgaagcgctcgacctcccctttctcaccaagcgcaaggaatcc
tatgatacggtgtcacagtcgtccggcgggtcggatacggttgaagtgcagcgagggggg
ccaggggtgctggggaaggggattgggggggtctcagggtttaagaccccactgaattcg
tccaatttgagcctggacaccacagggtcgtctcagctctcctccagtctgagctctgac
agtctgcttcaaggccacgaccccaagagcccagacaaggagccctggccatgtgacctg
gaaatctccaacacggagaacaatggcaatgccaagaggcctctcaaagatgttctggca
gacttcagggagagtgccaattccagtcaggactccatgcgcgaggattcgtacgtgtcc
accccaggcgcagaccacctctctgagaacactgctttcagtggctccgacagcgagacc
cagggacatgtcacacatctcactggcccctctaaccctgcttcactggggtcagaccag
gaggagccgtccaccaagacccacgccccctccaacgtgtactcgcacattgaagggccc
tccagtctcagtgactgtgtggagagcacatcgacaactcctcacctgcctgccactgag
acgccacaggagaaaaaaacagaatattctgttaagagcgcctcggagccttcagcccac
atgaacctacaccgcacaaccagcgtgctcagtcggatggtgtctacagactcagtcaca
cattcccactcctggatctctgaggatgacatctataagccacaccttgaggaactggct
gaccccgatgagtctttgctagggtctggcccagcttgtgtgaacggatttacctctccc
cctctagagcccgagaccccccagtccccccccagcgtggtccaccgcaggcagataggc
ctctccaaccctttccgcggactactgaagctgggacacctggagcggcggggcacggta
ggcatgtggcgcgactactactgcgagctctcgcccttcgagttccgcctctacctgaat
gcagaggagcgcacctgctgcgacaattgctccctgctgcgttgcgaggatgcctgcgtc
acctcggccgagggccgcttcgaccttgccttccccgggaaaaggctccttatgcgggcg
gccaactgcgatgaggccgaggactgggtggaccgcatcactgaagccgtcaacaagtgc
cgcccgcttcacctcctcgatgaccagtgggaggtgctgcagctctctgacagcagtgta
accccggatgagcccccaaaatcttccccttcatccccctcctccgtacccgccagtccc
aatcgagggggggctgtggttgagcaggtgcagcagctggagctggactggacgcgtccc
acagacccagagtcagacgccattaaggaagcggtgctgtacttctgccaggactccgag
cctcgcatctggactcctctcgtcttctccctctccttagagactctcaagggcttccgg
atgcaagatgggcagaaggtgctgcgctgctcccaccccatcgaggggatccgggacgtg
gtcccagacgtttctatgggtggaccagccttctttagggtcgtaacggccagggatacg
ctcaagctgagggccaagagctccgaggaggcacgggcctggagggacctcatcagggga
gccctggactcctacctggagagtggagaagactgggagcctgagagccccggggtggcc
cctggggtgggagggaacacccacagactggtgcagcatagactgaagggggacggggtg
ctgctggcccatctatgcacagtgcccacagagaaggggctggaccttcagggcttcaag
tgtgcaggttgttcaaaggtgataggcgtctcccgagggaaagccagactgtgtgagttt
tcagggcagtactactgcgacgcttgtcaccagggcgacaccatcgtcataccctcccgc
atggtgcacaactgggacctcgcacctcgggaggtctccaggcatgcccttaagctgctg
gctcagattgaacatgagcccctgctcaaccttgaccttttgaaccctgacctgtgggag
catgcagaggccatggcccaggcacagagccacagacagaggctgcgtctcctaggagac
tacctgctcacctgccgcagcggagcatgcaagaacatccagaccagactgggtccaagg
acatacttattggaatcaagccatctctacagtgtcatggacttacgacagatagcggag
ggaatgtatgtggcctacctgaacactttgatccagtttgcctccaaccacgtccaccac
tgtgacctttgcacccagaggggcttcatctgccagatctgtcacactagtgacatcatc
ttccccttccagtttgacaccaccaccaggtgtaaagagtgtaaggccgtgtctcacgta
acctgcaaggccaagtcgccttcctgtccacgatgcctgcgtcttcagaggtacctagag
agagatctgcaggactaa
DBGET
integrated database retrieval system
