Oncorhynchus keta (chum salmon): 118368117
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Entry
118368117 CDS
T09424
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04620
Toll-like receptor signaling pathway
oke04621
NOD-like receptor signaling pathway
oke04622
RIG-I-like receptor signaling pathway
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118368117
04621 NOD-like receptor signaling pathway
118368117
04622 RIG-I-like receptor signaling pathway
118368117
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118368117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
Sina_ZnF
CALCOCO1
Fez1
zf-RING_UBOX
TolA_bind_tri
EzrA
FapA
V_ATPase_I
BLOC1_2
DUF1664
zf-RING_6
Snapin_Pallidin
Exonuc_VII_L
DUF745
zf-TRAF_2
GAS
Motif
Other DBs
NCBI-GeneID:
118368117
NCBI-ProteinID:
XP_035607789
EnsemblRapid:
ENSOKEG00005046094
LinkDB
All DBs
Position
35:complement(20890502..20903662)
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AA seq
576 aa
AA seq
DB search
MSAGRNADVRELQIPLQHRSPSLAALSLAQRPWPSDPEAGFLPQHGGFWDHFIATPEPKY
CCEACRLVLCNPRQTECGHRFCETCISEQLSKPNPVCPADMEPLFKDKIFRDVCCHREIM
ALRVYCRSEKNGCKEQMSLHQVMDHLNVCPYFEVPCPLGKCKEKMMRKDIPEHLSWKCKH
RETTCEFCMHKMAMTELQKHKETVCPSCPVACPNHCTFPSILRSELTSHQHVCPKAHVTC
SFIRFGCNFKGLNQDMRDHESSFASEHLRLMATRNTTLEAKMEDVKGELLERYKVLPGLS
SRLSETESQYEEMRENNRQLEQKLTTMQNLMSSHSEKLLEMELELRSLRTIREEVETLRG
TVESIRSRVATLEGGRGGAIPATHTLGSLETQLSRQDDMLSVHEIRLADMDLRFQVLETA
SFNGTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLS
LFFVVMRGEYDALLLWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTAEMNIAS
GCPLFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagggcggaatgcggacgtgcgggagctgcagatccccctccagcatcgctct
ccctccctggctgctctctctctggcccagcgcccctggcccagcgaccccgaggcaggc
ttcttaccccagcacgggggcttctgggaccacttcatagccaccccagagcccaaatac
tgctgtgaggcctgcaggctagtgctctgcaaccccaggcagacagagtgtggacaccgc
ttctgtgaaacctgcatctccgagcagctaagcaaaccaaatccagtatgtccagcagat
atggagcctctgttcaaagacaagatcttccgtgatgtgtgctgccatagagagatcatg
gctctgagagtgtactgcaggagtgagaagaatggctgtaaggagcagatgagtctacat
caggtcatggatcatttgaatgtgtgtccgtattttgaggtgccatgccctttaggaaag
tgcaaagagaagatgatgcgcaaagacattcctgagcacttgagttggaaatgtaaacac
agagagaccacctgtgaattctgcatgcacaagatggccatgactgaattacagaaacac
aaagaaaccgtttgtccttcatgtccggtggcctgccccaatcattgtacttttccctcc
atcttacggagcgagctgacaagtcatcaacatgtgtgccccaaggctcatgtcacctgc
tcctttatccgctttggatgcaatttcaagggtctcaaccaagacatgagggatcatgaa
tcaagctttgcctctgaacacctgcgtctgatggcaacaaggaacactacgctggaggcc
aagatggaggatgttaaaggagagcttctggagcggtacaaggttctgccaggcctaagc
agccgtctgtctgaaacagagtctcagtacgaggagatgagggagaataacagacagctg
gagcagaagctcactaccatgcagaacttgatgagttcccactctgagaagcttttggag
atggagctggagctgaggtctctgaggaccatccgagaggaggtggaaacactacgaggc
accgtggagagcattcgttccagggttgcaacgctagagggaggaaggggcggggccatc
ccagccacacacacactaggttctttagagacacagctctcccgtcaggacgacatgctg
agtgtccacgagatccgcttggccgacatggacctgcgcttccaggtcctagagacggcc
tccttcaatgggacgctcatctggaagatccgtgactacaagcggcggaaacaagaagcc
gtggcgtcaaagaccctatctctctacagccagcctttctacactggatactttggctac
aagatgtgtgcccgggtctacctgaacggagatggcatggggaaaggaacccacctgtct
ctgttctttgtggtgatgcgtggcgagtacgatgccctgctgctatggccctttaagcag
aaggtgactctgatgttgatggaccagggcccagccaggaagcacctaggggatgccttc
aaaccagaccccaacagcagcagcttcagacgacccacggcagagatgaacatagcctcg
ggctgcccgctgttcgtggcccagactgtgctggagaacggtacttacatcaaagatgat
accatcttcattaaggtcacagtggacacatctgacctccctgacccttga
DBGET
integrated database retrieval system
