Oncorhynchus keta (chum salmon): 118368340 Help Entry 118368340         CDS       T09424                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04115   p53 signaling pathway oke04145   Phagosome oke04148   Efferocytosis oke04350   TGF-beta signaling pathway oke04510   Focal adhesion oke04512   ECM-receptor interaction oke04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:oke00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     118368340   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     118368340  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     118368340    04148 Efferocytosis     118368340   09143 Cell growth and death    04115 p53 signaling pathway     118368340   09144 Cellular community - eukaryotes    04510 Focal adhesion     118368340   09142 Cell motility    04820 Cytoskeleton in muscle cells     118368340  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:oke04131]     118368340   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oke00536]     118368340 Membrane trafficking [BR:oke04131]  Endocytosis   Phagocytosis    Opsonins     118368340 Glycosaminoglycan binding proteins [BR:oke00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118368340 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS cEGF TSP1_CCN Laminin_G_3 EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  118368340 NCBI-ProteinID:  XP_052352850 LinkDB All DBs Position 35:complement(31596311..31609281) Genome browser AA seq 1172 aa AA seqDB search MKLTGVFLLLVLWNCEGSRVAESRDDNSVYDLFELVKVNKRHQGVTLVKGADPYSPAYKI LNADLIPPVPEISFRDLIDSIQAERGFLLLVNFKQFKKTRGSLLTVERDDGSGPLFEIIS NGKAQTLDVVYSTGNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEMDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQSSATLTDV MTLDNPVNGSSPAIRTDYTGHKTKDIQQVCGFSCEDITSMFKELKGLGVIVKQLSNELNR VNKESTLLMNQMNIHSGVCLHNGIVHKDKDEWTVDDCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGNPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQESPCPINGGWGPWSLWDTCSVTCGGGLQTRQRLCNNPAPKYNGKECQGDTKTS QLCGKEDCPINGCLSNPCFAGAKCTSFDDGSWKCGSCPVGYTGNGINCKDIDECKEVPDA CFTLNAVHRCENTEPGYNCLACPPRYSGPQPFGRGVEQATAKKQVCTPRNPCQDGTHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDTDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL EHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNMDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLVHRPKSGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGMYVFSQEMTYFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacaggagtctttctccttttggtgctttggaattgtgagggcagcagggtg gcagagagtagagatgataacagtgtatacgacctattcgagcttgtgaaagtgaacaaa cggcaccaaggtgttaccttggtaaaaggcgcagatccttacagcccagcctataagatc ctgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattcg atacaagctgagaggggattccttctcctggtcaacttcaagcagttcaaaaaaaccagg ggcagtcttttgactgtggagagggatgacggatcaggaccgttattcgaaatcatttct aatggcaaggcgcaaactctggatgtggtatactccaccgggaacaagcaacaggtagtg tccatagaagatgcggatctagcgactggacactggaagaatatcacgctgttcattcag gaggatcgtgcccagctgttcgtcgggtgtgaagagatcaatatatcagaaatggacgta cccattcaaaaggtcctgacgcatgaggttgccgacattgcccgtctgaggatcggaaaa ggagctgtgaaagatagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc actttggaggcgattttacgcaataagggatgccaaagctctgcaactttgactgatgtc atgacactggacaatccagtaaatgggtccagcccagcaataaggactgattacactggc cacaaaaccaaagatattcagcaggtctgtggtttttcctgtgaggatatcaccagcatg ttcaaggagctcaaggggcttggtgtgattgtcaagcagctgtcaaacgagctcaacaga gtgaataaggagagcactctgctcatgaaccagatgaacatccacagtggggtctgtctt cacaacggcattgtgcacaaggacaaagatgagtggactgtggacgactgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgccccctgatgccctgtgcc aatgccaccgtgcctgatggagagtgctgcccacgttgtggaaacccgagtgactatgct gaggatggctggtccccctggtctgaatggacccattgttctgtgtcttgtggacggggt atccagcagcgaggtcgctcctgcgaccgcatcaacagcaactgcgaaggcacttctgtg cagacccgcgactgctaccctcaggaatgtgacaagcgctttaagcaggatggtggttgg agccactggtctccctggtcttcctgctctgtgacctgtggtgagggagtcatcacccgc atccgcctctgcaactcccccactccccagatgggaggcagagactgtcaaggacagggc cgagagacagaggtttgccaggaatcaccttgtccaattaacggaggctggggaccctgg tctctgtgggacacctgttctgtcacctgtggaggtggactccagactcgccagcgtctc tgtaacaaccctgcccccaagtacaatgggaaggaatgtcagggtgacaccaaaacatcc caattgtgtggcaaagaggactgccctattaatggctgtctgtccaacccatgctttgct ggagctaagtgtaccagctttgatgatggttcctggaagtgtggctcatgcccagtgggc tacaccggaaacggcatcaactgcaaggacatcgacgagtgcaaggaggtccctgatgca tgcttcacactcaacgcagtccaccgctgtgagaacactgagccaggctacaactgcctt gcctgcccccctcgctactcaggaccacagcccttcgggaggggagtggagcaggccaca gccaagaaacaggtgtgcacaccccgtaacccctgccaagacggcacccatgattgcaac aagaatgctaactgtatctacctgggtcagttcagcgacaccatgttccgctgtgagtgc aaacctggttacgctggcaatggccacatctgtggagatgacaccgacctggatggatgg cccaacaaagacctcctgtgtgtggagaacgccacctaccactgcaagaaagacaactgt ccaaaccttcccaattctgggcaggaggaccatgacaaagatgggcttggtgacgcttgc gatcacgatgatgacaatgatgggatccctgatgatagggacaactgcccaatggtctac aaccccgctcagtatgatgtggacacagatgacgttggtgatcgctgtgataactgtgtg catgagagcaaccctgaccaagtcgacacagacaacaacggagagggagatgcctgtgct attgacattgacggtgatggtattctaaatgagagggacaactgcccctatgtctacaat gtggaccagagagacactgacggggatggagtgggagaccactgcgacaactgccctctt gagcacaacccagaccagattgactctgactcagatcgtgtgggagacaagtgcgacaac aaccaggacattgatgaggacggtcatcagaacaacatggacaactgtccctatatcccc aacgccaaccaggccgaccacgacaaagatggcaagggtgacgcctgcgaccacgatgac gacaacgacggtatccctgacgacaaggacaactgcaggctggcctttaaccctgaccag ctggactctgatggtgatggccgtggagatgtttgcaaagatgactttgaccaagataac atacttgatatctacgatgtgtgccctgagaactttgccatcagcgagacggacttccgc aggttccagatggtaccactggaccccaagggcacctcccagatagaccccaactgggtg gtccgccaccagggcaaagagctggtgcagactgtcaactgtgaccctggcatcgctgtt gggttcgatgagtttaacgcagtggacttcagtggaacgttcttcatcaacacagacagg gatgatgactacgctggctttgtgtttggctaccagtccagctccaggttctatgtggtg atgtggaagcagatcacacagacctactggtcccacaccccgaccagagctcagggctac tctggagtgtccatcaaagtagtcaactccaccacaggacctggggagcatctgaggaac gccctttggcacaccggtgacactgctggacaggtacgtactctgtggcatgaccccaag aacattggctggaaagactacactgcctacagatggcacctggtccacaggcccaagtct ggactcattagagttgtgatgtatgaaggcaagagaatcatggcggattctggaaatatc tacgacaagacttatgctggtggaagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatacgaatgcagagattcttaa

DBGET integrated database retrieval system