KEGG   Oncorhynchus keta (chum salmon): 118368674
Entry
118368674         CDS       T09424                                 
Name
(RefSeq) transcription factor p65-like isoform X1
  KO
K04735  transcription factor p65
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04010  MAPK signaling pathway
oke04137  Mitophagy - animal
oke04210  Apoptosis
oke04218  Cellular senescence
oke04620  Toll-like receptor signaling pathway
oke04621  NOD-like receptor signaling pathway
oke04622  RIG-I-like receptor signaling pathway
oke04623  Cytosolic DNA-sensing pathway
oke04625  C-type lectin receptor signaling pathway
oke04920  Adipocytokine signaling pathway
oke05132  Salmonella infection
oke05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    118368674
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    118368674
  09143 Cell growth and death
   04210 Apoptosis
    118368674
   04218 Cellular senescence
    118368674
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    118368674
   04621 NOD-like receptor signaling pathway
    118368674
   04622 RIG-I-like receptor signaling pathway
    118368674
   04623 Cytosolic DNA-sensing pathway
    118368674
   04625 C-type lectin receptor signaling pathway
    118368674
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    118368674
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118368674
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118368674
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oke03000]
    118368674
Transcription factors [BR:oke03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    118368674
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer
Other DBs
NCBI-GeneID: 118368674
NCBI-ProteinID: XP_035608857
LinkDB
Position
35:complement(57331182..57343165)
AA seq 613 aa
MDGIYGWEQPPLNQGNPFIEIIEQPKQRGMRFRYKCEGRSAGSTPGEKSNDTTKTHPAIK
VHNYNGPLRVRVSLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRVHSFQNLGIQCVKK
KDVAEAVSCRLQTQNNPFNIPEANMWEEFDLNAVRLCFQASITLPTGELCPLEPVVSQPI
YDNRAPNTAELKICRVNRNSGSCIGGDEIFLLCDKVQKEDIEVRFFQGSWEGKGTFSQAD
VHRQVAIVFCTPPYCDTNLTEPIRVKMQLRRPSDREVSEPMDFQFLPSDPDEYRLMEKRK
RTEGMLQNLKLGSLMSGTMPAETRPFNIARRTVTAKPAASQPVMNPVAPPSAFSVKPQPY
YNGPQPGKLFQTQPKAEASSTAAETWKFLNSLTLDSQPKATPVASFTTNPQASAATAASS
QAFPTVNLLDFNGFAFHNFACPQEPVSAAPTPEPTSTFGVQGSQFKVDEELPEFPSFSEA
QAPGTLDSINIEEFQAMLGQSCLAGEGPKSSEASAPQEPCHLPSTNTVANNAAQNQADPA
NHHTGCGGSTWMNYPNSIVSLLQNEGMMESSPGNASQPAALDDLDVLSSMDEDRLMSILN
SGNQYSFVPGHQT
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggatggaatttatggatgggaacagccccctttgaaccaaggtaatcccttcattgag
atcattgaacagcccaagcagaggggcatgaggttcaggtacaagtgtgaggggcgctct
gcgggaagcaccccgggagagaagagcaatgacaccaccaagacacaccccgccattaag
gtgcacaactacaatggccccctgcgtgtccgcgtctccttggtgaccaagaacccacct
cacaagccccacccccacgaactggtggggaaagactgcaaacatggttactatgaggca
gacctgcaggagagacgagtgcacagttttcagaacctgggcattcagtgtgtgaagaaa
aaggatgtggccgaggcagtttcctgtaggctgcagacccaaaacaaccccttcaacatt
cccgaggcaaacatgtgggaggagtttgacctaaatgcagtgaggctgtgtttccaggcc
tcgatcactctgcctaccggggaactctgccctctggagcctgtggtgtcccagcccatc
tatgacaacagagcacccaacacagcagaactgaagatctgtcgagtgaacagaaactct
ggaagctgcatagggggggatgagatcttcttactttgtgacaaagtgcaaaaagaggac
atcgaggtgcggttcttccagggctcgtgggaggggaagggcaccttctcccaggcggac
gtacacaggcaggtggccattgtgttctgcaccccgccctactgcgacaccaacctgacc
gagccaatccgagtgaagatgcagctccgcaggccctcggatcgtgaggtcagcgagcca
atggacttccagttcctgccctccgacccagatgaatatagactgatggagaagagaaaa
cggacagagggaatgttacagaatctgaagctggggtccctgatgtcggggaccatgcca
gcagagacgaggccgttcaacattgccaggagaacagtcaccgccaagccagcagctagc
cagcctgtgatgaacccagtggcgccccctagtgccttctctgtgaagccccagccctac
tacaacggcccccagccaggcaagttgtttcaaacccagcccaaagcagaagcctcctcc
accgcagccgagacctggaagttcctcaacagcctgactctggactcccagcccaaagcc
acccccgtggccagcttcaccaccaacccccaggcctctgcagccacagccgcctcctcc
caggcctttcccaccgtaaacctgttggacttcaacggattcgctttccacaactttgct
tgtccccaggagccggtgagtgcagcccctacaccagagcccacctctaccttcggggtc
caaggctcccagttcaaggtggatgaggagctacccgaattccccagcttttctgaggca
caagcgccagggactctagatagtataaacattgaagaattccaggctatgctgggccag
agttgtctggctggagaagggccaaagagcagtgaggcgtcagcccctcaggaaccctgc
cacttaccctccaccaacactgtggccaacaacgcggcccagaaccaagcagacccagcc
aaccaccacaccggctgtggcggcagcacctggatgaactaccccaacagcattgtcagc
ctgctccagaacgagggcatgatggagagttcccccggcaacgccagccagccggccgcc
cttgacgacctggacgtcttaagctccatggacgaagaccgtctcatgtccatcctgaac
agtggcaaccaatacagttttgtgcccggacatcagacctaa

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