Oncorhynchus keta (chum salmon): 118369667
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Entry
118369667 CDS
T09424
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
118369667 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118369667 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
118369667 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
FXa_inhibition
EGF
hEGF
Plasmod_Pvs28
EGF_TEN
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
118369667
NCBI-ProteinID:
XP_052354461
LinkDB
All DBs
Position
36:13144078..13291208
Genome browser
AA seq
1809 aa
AA seq
DB search
MAWIRWDLLFSIGLFMSPAFVSTDQSGFRRYYVLQPGPSGTDRVHVSSISSRSSATGQPH
AYNVELTASYGNQVRTRRMGNQANPIPLRQDTQFTQHQQVIRQTSHNVHQSHQMKISGVN
VCGGQCCHGWSKASGSQRCTKPKCLPQCQNGGMCLRPQLCVCKPGFNGKACEQKTMPTSS
IPAQPGKGHTNGHTNGRSIVPQRPIPQQVPIPQQGYAPVPVSNMAQMTLTVKKSPHLVRP
QQSRPGSQQFVLKPKYYNTHTTHSQTRVQHQPDRPIPLTVEHNPIHVGNHTGRIKVVFTP
TICKVTCTGGRCQNNCELGNTTTIVSENGHAADTLTAPNFRVVVCHLPCMNGGKCSARDK
CQCPATYMGKFCQMPVQNGNGQQQTSQIHSTHTLPLTFSNGQNPVKYAPSIVNIHVKHPP
EASVQIHQVSQLDANGQKVKGNGQNGHSQTQSHYTYHHSDSRQKIQQQGHNIIYPNQQSY
VPQYQPVSSKSQLGRCFQETTGTQCGKALPGLSKQEECCQSIGTSWGFHKCQKCPKPSIP
LTAGGSRHAMDCPQGYKRINNSHCQDLNECQLQGVCPNGDCLNTMGSYRCSCKVGYIPDP
TLSTCIPDTSAIHEEKGACFRLVSSGKQCLHPVSAQLSKQLCCCSVGKAWGPRCDKCPLP
GTAKFKEICPGGMGYTVTGSYKPKPPNKLPSQPETINKPMITHQEPVAPPLPLPTHEKPV
EALSVAERQLPSVPVATEAPEQELVILEATSSSPIVEAEAGQPQLSPGVSTMRMEPAYKE
VVEEMSPPAPALILPTNAGQDIAPTQSAEVDECKVNPHICGQGICYNTAEGYTCTCNEGY
QMDETHTTCVDVNECLDSASLCSNGRCKNTPSSFLCVCQPGFMTDEEGTSCIDLNECLNT
HTCPEDEFCVNTVGSYTCLHCDSGYRMSPTGQCEDVNECLDLGVCPSGLCINFPGSYECD
LCPKGFQGQGGQCVDVDECLDPSTCANGRCSNFEGYFVCFCNDGFTLSLDGQSCEDVDEC
LDPSTCANGRCSNFEGYFVCLCNDGFTLSLDGQSCEDVDECLDPSTCANGRCSNFEGYFV
CFCNDGFTLSLDGQSCEDVDECQDEQVCTRGHCQNTEGSFLCNCGPGFRASPAGDQCDDV
DECQKLTMPCDRVGQCVNNMGSYHCSCPQGYQQINGTSCLDVDECLDDPELCSPHGECLN
AEGSFYCVCERGFAAGQDKHTCEDVDECSHGTRCVGGSCENSQGSYRCLCDSGYRLQADT
DTCLDIDECSELGRSICGAWQCENMEGSYRCVVDCPPGHNHGPEGICMDIDECNVNATGC
GSHGFCENMVGSFRCLCDRGYQESQEGLGCVDVNECDLLSGVCGEALCENVEGSFLCMCP
DEDQEYNQMTAKCSPAPTASSVERKECYYNLNDENLCENVLTSSVTMEECCCTLGAGWGD
NCEVHPCPVQGTDQFSQMCPAGRGSVPTGDTVFGVTAAESYKDADECALFGQEICKDGFC
FNSPGSYECYCKTGLYYDEVKLQCRDIDECQEVSSCVEGVCLNTHGSYMCFCTHPMVLDS
DNRSCVIAPDVAEQHGEQTGYQGVCWQTVTDNLTDNLTDTLTDTLTDTLTCTKPLANRKT
TYTECCCLFGEAWGMDCTLCPLKNTEDYASMCNVAMSGGQGHPYGRDALVAGPVQEYEVS
LDYEPHPDQPGALPLYEDEENLSDAFEGLRAEECGILNGCENGRCVRVQEGYTCDCFDGY
TLDMSRMACVDVNECSELNNRMSLCKNSKCINTQGSYKCVCLPGYTPSERPNYCVAREQG
EAAVATERE
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatcagatgggacctcttgttttctataggtttattcatgtcaccagcattt
gtgtccacggatcagagtggctttaggagatactacgtgttgcagccaggtccgagcggg
acagacagggtacatgtgagttccatttcttcgcgctccagtgccacaggacagccccat
gcctacaatgtggagctcacggccagttacggtaaccaggtccgaacccgtaggatgggc
aatcaagcgaacccgatcccgcttcgccaggatacacagtttactcagcaccagcaagtc
attcggcagaccagccacaacgttcaccaaagtcaccaaatgaaaatttcaggggtgaat
gtctgtggagggcagtgctgtcacggatggagtaaggcctctggatcacagcggtgtacc
aagcccaaatgcctgccccagtgccagaatggaggaatgtgtctgaggccccagctctgt
gtctgcaagccgggcttcaatggcaaggcatgtgaacagaagaccatgcccacctcctcc
atcccagcgcagccagggaagggccacaccaatggacacaccaatggccgtagcatagtg
ccccagaggcccattccccagcaggtgcccatcccccagcagggttatgccccagtccct
gtcagcaacatggctcagatgaccctgaccgtcaagaagtccccccaccttgtccgaccc
cagcaaagccgacctggtagccagcagtttgtcctgaagcccaagtactacaacacacac
accacacactcccagactcgcgtccaacaccagcctgacagacccattcccctgacggtg
gaacacaaccccatccatgtggggaaccatacaggccggatcaaggtggtcttcacaccc
accatctgcaaggtgacctgcacggggggccggtgccagaacaactgtgagctgggcaac
accaccaccatcgtcagtgagaacggccatgccgcagacaccctcaccgcccccaacttc
agagtagtggtatgccatctgccctgcatgaatggagggaagtgcagtgccagggacaag
tgtcagtgcccggctacctacatggggaagttctgccagatgcctgttcagaatgggaat
gggcagcagcagacatcccagattcactccactcacactctgcctctcaccttcagcaat
ggacagaaccctgtgaaatatgcccccagcatcgtgaacatccatgtgaagcatcccccg
gaggcctcggtgcagatccatcaggtctcccagctggatgccaatgggcagaaggtgaaa
ggcaatgggcagaatggccactcccagacccagtcccactacacctaccaccactcagac
agcagacagaagatccagcagcagggacacaacatcatctaccccaaccagcagagctac
gtcccccagtaccagcccgtctcctccaagagccagctgggacgctgcttccaggagacc
accggcacacagtgtggcaaggccctccctggtctcagcaagcaggaagaatgctgtcag
agcatcggaacatcctgggggttccacaaatgccagaagtgcccaaaaccatctattcct
ctgacagcaggaggatcaagacacgcgatggactgcccccagggatacaagcgcatcaac
aactcccactgccaagatcttaatgagtgccagctgcagggtgtgtgtcccaacggagac
tgtctgaacaccatgggcagctacaggtgcagctgtaaggtcggctatatccctgacccc
accctctccacctgtatccccgacacctctgccatccacgaggagaaaggggcttgtttc
cgattggtcagttcggggaagcagtgtttgcacccggtgtctgctcagctgagcaaacaa
ctctgctgctgcagtgtgggcaaggcctggggcccgcgctgcgacaagtgtcccctacca
ggaacagctaaattcaaggagatatgccctggtgggatgggctacactgtcacaggatct
tacaagcccaaaccacccaataaactacccagccaacctgagaccatcaacaagccaatg
atcacccaccaagagcctgtggccccgcctctgcccctgccgacacatgagaaaccagtg
gaggccttgagcgtcgctgagagacagcttccctctgtaccagtagccacagaagcacct
gagcaggagctggttattctggaggctactagtagtagtccaatagttgaggccgaggct
ggccagccacagctctctcccggtgtctctaccatgaggatggagccggcctacaaagag
gttgtggaggaaatgtccccccctgctccagccctgatcctccccaccaacgctggccag
gacatcgcccctactcagtcagcagaggtggatgagtgcaaggtgaaccctcacatctgt
ggccaggggatctgctacaacactgccgagggttatacctgcacctgtaacgagggctac
cagatggacgagacacacaccacctgtgtagatgttaatgaatgcctggattctgcatca
ttgtgctctaacggccgctgcaagaacactcccagcagcttcctgtgtgtgtgccaaccg
ggcttcatgacagatgaggagggaaccagttgcattgatttaaacgagtgtctgaacacc
cacacgtgtcctgaggatgagttttgtgtcaacaccgtgggttcctacacctgtttgcac
tgtgacagtggctacaggatgagcccaacaggccagtgtgaagatgtaaatgagtgtctg
gacttgggtgtgtgtccatccggcctgtgcatcaacttcccaggctcgtatgagtgtgat
ctgtgtccaaagggcttccagggccagggaggacagtgtgtcgacgtagacgaatgcctg
gacccgtcaacttgtgccaacgggaggtgctccaactttgagggatactttgtctgcttt
tgtaacgatggattcacactcagcttagatggacagtcatgcgaagacgtagacgaatgc
ctggacccgtcaacttgtgccaacgggaggtgctccaactttgagggatactttgtctgc
ttgtgtaacgatggattcacactcagcttagatggacaatcatgcgaagacgtagacgaa
tgcctggacccgtcaacttgtgccaacgggaggtgctccaactttgagggatactttgtc
tgcttttgtaacgatggattcacactcagcttagatggacagtcatgcgaagatgtggat
gagtgccaggatgagcaggtgtgtaccaggggacactgccaaaacactgagggctctttc
ctctgtaactgtgggcccggctttagggcctccccggcaggggaccagtgtgacgatgtg
gatgagtgccagaagctgaccatgccctgtgacagggtgggccagtgtgtcaacaacatg
ggctcctaccactgcagctgccctcagggctaccagcagatcaacggcaccagctgccta
gatgttgacgagtgtctggacgacccggagctgtgttccccacacggggagtgtctcaac
gctgagggctccttctactgcgtctgtgagagaggcttcgctgccggccaggacaaacac
acctgtgaagatgtcgatgagtgctcgcatggcaccaggtgtgttggcggctcctgtgag
aacagccagggttcctacagatgcctgtgtgacagtggctaccgcctgcaggcagacact
gacacatgcctggatatcgacgagtgttcagagttggggcggagcatctgtggggcgtgg
cagtgtgagaacatggagggctcctataggtgtgtggtggactgcccccctggacacaac
catggcccagagggcatctgtatggacattgatgagtgcaacgtcaatgccacagggtgt
ggcagccacggcttctgtgaaaacatggtcggatccttccgctgcctgtgtgaccggggc
taccaggagtcccaggagggcctcggctgtgtggatgtcaacgagtgtgatctgctgagc
ggtgtgtgtggcgaggccttgtgtgagaacgtggagggctccttcctgtgtatgtgcccc
gacgaggaccaggagtacaaccagatgaccgccaagtgcagtcccgctcccacagcctcg
tcagtggagaggaaggagtgttactacaacctcaatgatgagaacctgtgtgagaacgtg
ctgaccagcagtgtcaccatggaggagtgctgctgtacgctgggggcaggctggggggac
aactgtgaggtgcacccctgccccgtccagggcactgatcagttttcccagatgtgtcca
gctgggagaggcagtgtcccaaccggtgacactgtgtttggagtgactgcagccgagagt
tataaagatgcagatgagtgtgcgttgtttggccaggagatctgtaaggatggcttctgc
ttcaacagcccaggaagctatgagtgttactgtaagactggcctgtactacgacgaggtc
aagttgcagtgcagagatattgatgagtgtcaggaggtgtctagctgtgtggagggagtg
tgtttgaacacacatggctcctacatgtgtttctgtacacacccgatggtgttggactct
gacaacaggagctgtgtgatcgcccctgacgtggcagagcaacatggtgagcagactggc
taccagggtgtttgctggcagacggtaacagacaatctgacagacaatctgacagacact
ctgacagacactctgacagacacgctgacctgcaccaagccccttgccaacagaaagacc
acatacacagagtgttgctgtctgtttggagaggcctggggcatggactgtaccctctgc
cccctcaagaacacagaggactatgcctccatgtgtaacgtggcaatgagtggaggacag
gggcatccgtatggtcgcgatgccctcgtggccggccctgtccaggagtacgaggtcagc
ctggactacgagcctcaccccgaccagcctggtgccctgcccctgtacgaggacgaggag
aacctgtccgatgcgtttgagggcctgagagcggaagagtgtggcattctgaacggctgt
gagaacgggcgctgcgtgcgggtacaggagggctacacctgcgactgcttcgacgggtac
accctggacatgtcccgcatggcgtgtgtggatgtgaatgagtgttctgagctcaacaac
cggatgtccctctgcaagaactccaaatgtatcaacacgcaaggatcctacaagtgtgtg
tgcctgccgggatacaccccctctgagcggcctaactactgtgtggccagggaacagggg
gaggcagcagtggccacagagagggagtga
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integrated database retrieval system
