Oncorhynchus keta (chum salmon): 118369714 Help Entry 118369714         CDS       T09424                                  Name (RefSeq) protocadherin-15-like isoform X1   KO K16500   protocadherin-15 Organism oke  Oncorhynchus keta (chum salmon) Pathway oke04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:oke00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     118369714  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:oke03037]     118369714    04515 Cell adhesion molecules [BR:oke04515]     118369714 Cilium and associated proteins [BR:oke03037]  Primary cilia and associated proteins   USH complex and associated proteins    118369714 Cell adhesion molecules [BR:oke04515]  Cadherins   Protocadherins    118369714 SSDB OrthologParalogGFIT Motif Pfam:  Cadherin ECD Ig_CLSTN Cadherin_CELSR2_9th Ig_Cad99C_N Cadherin_FAT4_N Cadherin_2 Motif Other DBs NCBI-GeneID:  118369714 NCBI-ProteinID:  XP_035610235 LinkDB All DBs Position 36:16377853..16647075 Genome browser AA seq 1272 aa AA seqDB search MRRGPCLFRWLGISMALLSLTTYSWAQKTEDWQYEECKLSRSGPPATIVTIDEESPNGTV LVENMQINGRAEDPDRTISLILLDNYAYWVILDPLRQRLFLNSTGRVLDRDPPSSITTIV VKVQCTSELVGTVILHEVRIVVRDKNDNTPRFQQPRYYVAVNELTPAGTTIFTGFSGENG ATDIDDGPNGQIEYGIQYNPNDPVSNTTVVVGNTLSGNIVLAERLNYEEKTRYLVIVKAN DRAPYDANRRTATTTLTIDVLDGDDLGPMFLPCVLVNNTHDCNPVTYRVTIPEFTKPSEL NPLGVTPPIQAVDMDRNIQPPSKRPGIHYYILVGQPSKYPDYFSLNKTTAELLLLKPVSR DLYTKFTLIIKAEQDNGHPLPAYAELIIDVLDENNQAPYFQFQSYQGYVSESSPVGTTIS AGSNLTAPLGIIALDKDIEESKDPLVTVTLDDFSTSFAITPTGITRYLRLLKPVDREKQM TYTFTMMASDGVQESTRVTVNILVIDANDNTPTFGEVSYSVKVFTDMQQGETVLQLMALD ADEGLNGLVTYEILAGAQGVFIINNRTGRITIAPGIALSVGLSYALTVKAADNAPEIQRR SSITTVYIEVLPPNNQSPPRFPLFIYNLEVSEAMRIGAILLNLQATDRENDPITYQILSG DTQQVFNLSKTIGLLLLGKPLDRETTDQYRLIVTASDGNPGGTSTTTVNIVVTDVNDNDP KFDLTLPRNLTVQEEKANVFVGQVTATDPDAGANGLVRYKIVNHPGLFTITENGSISTVV PLDREVRSQYDLIVEASDGAVDPRRTTFTLSVQVTDIDDNSPEFSQKTYVVNVPENSPVG TVVLRLSAVDADLFSNITYRIKSAEARKLFSVNPISGELLVLQTLDFEDLASMGMGTNYT FQVEAVDQAGTMPPGEATVTVRITDMNDFSPVFSQALYKGLVAPNAEKGTVIATVFAEDQ DPPGTPASLVRYRVDEDQSPYSGSIFDVEKGSGRVITRVNLNEQPSVTFKLVVIAFDDGE PVKENRTLVEITVLQPSRIPIFTQEEYRFAPVSELAPVGRPVGSILAAAINQTIFYSIVG GNERGEFQVSNRTGVISTAKPLDYETVTSYVLRVQADSMVVVMAQLRVPSKSNTAKVFIE VRDENDHPPVFTRKLYIGGVAEDAKTFSSVLKIVATDADTGNYSANAYRLIIPPTTDGQD SFVIEQYTGIIKTAIMYRNMRRSYFKFAVIATDNYGEGLSSSADVVLLESGVLLICQPNK SLMRLKKCWNGA NT seq 3819 nt NT seq  +upstreamnt  +downstreamnt atgcgacgggggccatgtctcttcagatggctggggataagcatggcgctcctctctctg accacctacagctgggcccagaaaaccgaagactggcagtatgaggaatgtaaactgtct cggtcaggcccccctgctaccatagtgaccatcgatgaagagagccccaatggcacagtt ctggtggagaatatgcagatcaacgggagagcagaggacccagacaggaccatctctctg atcctgcttgacaactatgcctactgggtcatcctggatcccctcagacagagactgttc ctcaacagcaccggacgtgtcctggacagagatcccccttcctctatcactacaatcgtg gtgaaggtccagtgcaccagtgagctggttgggacagtgattcttcacgaggtccggatt gtagtcagggacaaaaacgacaacacacctcgctttcagcagccacgctactatgtggcc gtcaacgagctcactcctgccgggaccaccatattcacaggcttcagtggagaaaatggg gccacagacatcgatgacgggcccaacggacagatagaatatggcatccagtacaacccc aatgacccagtgtctaatacaactgtggttgtagggaatactctctctggaaacattgtt ctggctgagagactaaactacgaagagaaaacacgctacctggtcattgttaaagccaat gaccgtgccccgtacgatgccaataggcggaccgctacaaccacattgacaatagacgtt ctggatggagatgacctgggccccatgttcctgccctgtgtcctggtcaacaacacccac gactgcaacccagtcacctaccgagtcaccataccagaattcaccaaaccgagtgaactg aacccactgggggtgaccccacctattcaagctgtggacatggacaggaacattcagccc ccgtctaaaaggccagggatccattactacatactggttggccagccctcaaagtaccca gactacttctccctgaacaagacgaccgcagagctcctcctcttgaaaccagtcagcaga gacctgtacaccaaatttaccctcatcatcaaagctgagcaggacaatggccacccactc ccagcatacgctgaactgatcattgatgtcctggatgagaacaaccaggctccgtacttc cagttccagtcctaccagggatacgtcagtgagtcctccccagtaggcaccaccatctct gccggctccaacctcactgcccccttgggcataatcgccctggacaaagacattgaagag agcaaagaccctctggtgacagtgactctggatgacttcagcaccagctttgccataacc ccgaccggtatcacccgctacctccgactgctcaaacctgtggacagagagaagcagatg acctacaccttcacgatgatggcatcagatggggtacaggagagcacgcgggtgactgtc aacatcctggtgattgacgccaatgacaacactcccacctttggtgaagtctcctacagc gttaaggtgttcactgacatgcagcaaggagaaacagtactacagctgatggcattggat gctgatgaggggttaaacggtctggtgacctatgaaatccttgccggagcgcagggtgtt ttcatcatcaataaccgaactggacgaatcaccatcgcacccgggatagcccttagcgtg ggcctttcttacgccctcacagtgaaggctgcggacaatgcaccagagatccagagaagg agctctatcaccacggtgtacatcgaggtgctgccccccaacaaccagagccccccacgc ttccccctcttcatctacaacctggaggtcagcgaggccatgaggataggagccatcctg ctcaacctacaggccacagacagagagaatgacccaatcacataccagattttgagtggg gatacccagcaagtcttcaacctctctaaaacgataggcctgctgcttttggggaagcct ctggacagggagacaactgaccagtaccgtctcatcgtcactgcctctgatggcaaccca ggcgggacctccaccaccacagtgaacatagtggtgactgatgtaaatgataacgaccct aagtttgacctgactctgcccaggaacctcactgtccaggaggagaaggccaacgtgttt gtgggtcaagtcacggccacagatccagatgcaggggctaatggtctggtgcgctacaag atagtcaaccacccaggtcttttcaccatcactgagaacggcagcatatccaccgtggtg cctctggaccgagaggtcaggagtcagtatgacctcatagtggaggcctcagacggagcg gtggacccccgcaggaccaccttcaccctctctgtccaggtgacagacatcgatgacaac agcccagagttttcccagaagacctacgtggtcaatgttccagagaacagccctgtgggt accgtggtcctgcgcctcagtgcggtggatgcagacctgttctctaacataacataccgt atcaaatctgcggaggccaggaagcttttctcagtgaacccgatctcgggcgagctgttg gtcctgcagacgctggactttgaggacctggctagtatgggcatggggaccaactatacc ttccaggtggaggccgtggaccaggcagggacaatgccccccggcgaggccacagtcact gttcggatcacggatatgaatgacttctccccggtgtttagccaagcgctgtacaagggc ctggtggcccccaacgcagagaagggaacggtcatcgccactgtgttcgctgaggaccaa gaccctcctggtactccagccagtctggtgcgttacagagtggacgaggaccaatcacct tacagcggtagcatctttgacgtggagaagggatctgggagggtcatcaccagggtcaac ctcaacgaacagcccagcgtcaccttcaagttggtggtgatagcgtttgacgatggagag ccagtgaaggagaaccgaaccctggtggagatcactgtcctccagccctccaggatcccc atcttcactcaggaggagtacaggtttgctcctgtcagtgagctggccccagtaggcaga ccagtgggcagcatcctggcagccgccatcaaccagacaatcttctactccatcgtggga ggaaacgaacgcggtgagttccaagtgagtaaccggacaggtgtgatctccacggctaag cctctggattatgagactgtcaccagctacgtgctcagggttcaggctgactccatggtc gtggtcatggcccaactgcgggttccctctaaatccaacacagccaaggtgtttatcgag gtgcgggatgagaacgaccacccgcctgtcttcaccagaaagctctacatcggtggcgtg gctgaagacgccaagaccttctcgtctgtgctgaagatagtggccactgatgcagataca gggaactacagtgccaatgcgtaccggctgatcatcccgcccacgacagatggtcaggac agctttgtgatcgagcagtacacgggcatcatcaagacggctatcatgtaccgcaacatg cgcaggtcctacttcaagtttgcagtcatcgccaccgacaactacggagagggcctgagc agcagcgctgatgtggtgttattggagtcaggggttctcctaatatgtcagcctaacaaa tctctaatgagactgaagaagtgttggaacggcgcctga

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