Oncorhynchus keta (chum salmon): 118369984
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Entry
118369984 CDS
T09424
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118369984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118369984
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
118369984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
zf_C2H2_ZNF292
CRM1_C
Motif
Other DBs
NCBI-GeneID:
118369984
NCBI-ProteinID:
XP_035610633
LinkDB
All DBs
Position
37:11961331..12036330
Genome browser
AA seq
1532 aa
AA seq
DB search
MSGMETSAPTTTEKKGSGLDGNGFTDLPKKLSPSAVTRAPHHVFPTFHTPIPIDMRHHEG
RYLYEPHTLHAMHGPGLGGSPVMSDISLIRLSPHAAGTGESPFSPAHPYFNPHMEHYLRS
IHSSPTLSMISAARGLSPADLAHEHLKERGLFGLPPPPPGASPAEYYHLMASHRNPYGEL
LMQGGGAAAAHLPDYITPMDASRFSSPRLTPRLNRKRALSISPLSDASIDLQTMIRTSPN
SLVAYINNSRSSSAASSSYGHLSVGGISPSFTFPHHINPMAYQQLLSQQRGLSVFGHTPP
LIQPPPTFSSRQSALGLSSLAPASHNHNNGSQSKNTSGDSAVSSTVNPMITKRSKVKTEV
ECPRPLSPCSPDHLGGMLDMKEDLDKDECKHEPEMVYETNCHWEGCSKEYDTQEQLVHHI
NNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLE
NLKTHLRSHTGEKPYVCDHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKVPGCTKRYTDP
SSLRKHVKTVHGPEAHVTKKQRSDLPPSRPMPPKENGENETGRGMEEKMDSTSRGTEDYL
QATSIKTENSVMYQSSPGGQSSCSSEPSPLGSSTNHDSGVEMALHSSGGSMGDLTGLDDP
SGPLMDSSSFSGLWSGTAGVGVGLHLRQHLGLSHIHRLEHLKKEKLKTVRDSCQWANHHT
SPPVQNTKLPPIPVSGSLLERGNMDGGPGSFLSLSELCSSKVTVLDQLDHLMERRDSATS
TVSSAYISRRSSGISPCHYSRCSSDASTFSGHRHHNISSTGSYDPISTDLSRRSSNASQS
GGGGGLPSHLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLKTCMALYKDASQGDSS
SGSSSFNPIAPSGVPRRCSGDMGGYNGRSMMPHEAPSNIPRRASDPVPRPPPLDPLSHQP
QVQRYNSTGNMQNLHPHASQPNQAPSAAERCHLAPQSHQPRSDSSLQRYPYCPRPPSISE
NVAMETMAGDMSGSRNNSEEEMMILPDDVVHYITSQGGAGESDCANGYNRQAQCGFHGNT
INPNPQQQQQFYHQQRMAVVDTNMNMNPSSAPQTMPLFCALSSGHPQQSFPSLPSKTSTM
PVQWNEVSSGTVEALHNPSQQLAFGRSNPNLAMVQQKQNFVSFQNQNLNSNQHIAQMIHN
LAHAAQQGRYIELQKADSRLSCVQQQSLQQQQPANANLNEPVSLGHGFNQGLGPSDATAN
ANQRSSCSSMAVGGTLGMLSQNSKQQQTVHTVDMKQNSRLGAQPGGSQSSQVTFKDSGVN
SSRMISQKYNIASQVQHPIQNGGQILLQPRPPTEPKSLSRQHSGSMTMQRQNSIGNHCSN
GNNKDSNVMYYTGQIHMFEPNGNVNMQMMASSVVDVLQCPSDSTETAMTSPGVSNQVSST
VDSSNGTGAEEPQIDFDTMLDDGDHSSLMSGTISPSILQSLSQTSSRLTTPRNSVTLPSL
PLPAGGSNMAIGDMSSLLTALAEENKFLNMMS
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaatggagacctctgccccgacgaccacagagaagaaaggctctggtctggat
ggaaacggcttcactgacctcccgaagaaactctcaccttcagctgtcaccagagcgcct
caccacgtcttcccgacgttccacacgcccatcccgattgacatgcgtcaccatgaggga
agatacctctatgaaccacacaccctacatgccatgcatggtcctggactaggtggcagc
ccggtcatgtcagacatctctctgatccgtctgtccccccacgcagccggaacgggggag
tcccccttcagccccgctcacccctacttcaaccctcacatggagcactacctccgctcc
attcacagcagcccaaccctgtccatgatctctgcggcccgcggactcagccctgcagac
ttggcgcatgaacacttgaaagagcggggtctgtttgggttgccccctccccctcctgga
gccagccctgctgagtactaccacctgatggccagccaccgtaacccctacggagagctg
ctgatgcaggggggtggggcggcagctgcacacctgccagactacatcacccccatggat
gcgtcacggttctccagtcccagactgacccccaggctgaacagaaagcgagccctgtcc
atctctcctctctcggatgccagcatcgacctgcagaccatgatccgtacctcgcccaac
tctctggtggcctacatcaacaactcacgctccagctctgcagccagcagctcctacgga
cacctctctgttggaggcatcagtccgtcctttacattcccccatcacatcaaccccatg
gcctaccagcagctcctgtcccagcagagaggcctgagtgtgttcggccacacccctcct
ctcatccagcccccacccaccttctccagtcgccagtctgccctgggtctctcctctctg
gcccccgcctcacacaaccacaacaatggctcacagtcaaagaacacaagtggggactcg
gcagtgagcagtacagtcaatcccatgatcaccaagaggtcaaaggtgaagacagaggtg
gagtgtccgaggccactgtccccatgttctccggatcatctaggtgggatgctggacatg
aaggaggacttggataaagatgaatgcaagcatgagccagagatggtgtatgagaccaac
tgccactgggaaggatgctccaaggagtacgacacgcaggaacaactggtccatcacatc
aacaacgaccacatccacggggagaagaaggagtttgtgtgccgctgggatgagtgttcc
agggagcagaagccttttaaggcccagtacatgctggtggttcacatgaggagacacacg
ggggagaagccacacaagtgtacctttgagggctgctgtaaggcctattctcgcctggag
aatctgaagacccacctgagatctcacaccggggaaaaaccatatgtgtgtgaccacgag
ggatgcaacaaagccttctctaacgcctcggacagagccaagcaccagaaccgcacacac
tccaacgagaaaccctacgtgtgtaaagtccccgggtgtacgaagcgctacacggacccc
agctctctcaggaagcatgtgaagacagtccatggaccagaggcccacgtcaccaagaaa
cagcgcagcgacctgccgcccagcagacccatgccacccaaagagaatggagagaacgag
acaggccggggcatggaggagaagatggacagcacctcgagaggtacggaggactacctc
caggccacgtctatcaagacggagaactctgtgatgtatcagtccagccctggtggtcag
tcgtcatgtagcagcgagccgtcaccacttggcagttccaccaaccatgacagtggagta
gagatggccctccacagcagcgggggaagcatgggggacctgactgggctggacgacccc
tcagggcccctcatggactcctcctccttctctggcctctggtctgggacagcaggggtc
ggggtgggcctccacctccgtcaacacctaggcctcagccacatccacagactagaacac
ctgaagaaggagaaactgaagactgtgagggactcctgccagtgggctaatcatcataca
tctcctccagtccagaacaccaagctaccgcccataccagtaagcgggtcccttctggag
agaggaaatatggatggtgggcctggatcgttcctcagcctcagtgagctgtgttccagt
aaggtgactgtcctggaccagctggaccatctgatggagcgcagggacagcgccaccagc
accgtctcctctgcctacatcagccggcgctcctctggcatctccccctgccactacagt
cgctgctccagcgacgcctccacgttcagtggccaccgtcaccacaacatcagttccacc
ggctcctacgaccccatctctacagacctgtcccggaggtccagcaacgccagccagagt
ggaggagggggagggctgcccagtcacctcagcctcacccccgcccagcactaccacctc
aaggctaaatatgcggcggctacaggcggagccccacccacacctctacccaacatggag
aggatgagtctcaagacctgcatggccctctacaaggatgcttcccagggagactcgtcg
tctggttcctcctccttcaaccccattgcccccagtggtgttcccaggcgctgcagcggc
gatatgggaggctataacggccgcagcatgatgccccacgaagctccgtccaacattccc
cgtcgggctagcgaccccgtcccccgaccgccgcccctggacccgctgtcccatcagcct
caggtgcagcgctacaacagcacgggcaacatgcagaatctccacccacacgcctcccag
cccaaccaggccccgtctgcagccgagcggtgccacctggcgccccagagccaccagccg
cgctccgacagcagtctgcagcgatacccttactgcccccggccgcccagcatctctgag
aacgtggccatggagaccatggccggcgacatgagcggtagtcgcaacaacagtgaggag
gagatgatgatacttccggatgacgttgttcactacatcacctctcagggcggagctgga
gagtcagactgtgccaacgggtacaaccgacaagcacaatgtggtttccatggaaacaca
ataaaccctaacccccagcagcaacagcagttttaccaccagcaaaggatggctgtggtg
gacaccaatatgaatatgaacccctcgtctgcaccacaaaccatgcccctcttctgtgcc
ctaagctcaggccatccgcagcagtctttcccctccttacccagtaagacgagcaccatg
ccggtgcagtggaacgaggtcagctcaggtactgtggaagctcttcacaacccaagtcaa
cagctggcgttcggtcgaagcaacccaaacctcgccatggtccaacagaaacagaacttt
gtctcgttccagaatcagaatcttaactccaaccaacacattgcacagatgatccacaac
ctggctcacgcagcccagcaggggagatacatagagctgcagaaggcggactcaaggctg
agctgtgtccagcaacagagcctacagcaacagcagcccgctaatgctaacctcaatgaa
ccagtgagtctcgggcatgggtttaatcagggtcttggtcctagcgatgctaccgctaac
gctaaccagcggtcctcctgtagtagtatggcagttggtggcactctgggtatgttgagc
caaaacagtaaacaacaacagacggtgcacactgtagacatgaagcagaacagccggctg
ggggcgcagccaggggggagtcaatcgtctcaagtcacatttaaggatagcggtgtgaat
tcttcacggatgatctcacagaagtataatatagcgtcccaggttcagcatcccatccaa
aatggaggtcaaatactcctccagccaaggccgcccacagaacctaagtctctaagcaga
cagcattcagggtcaatgacaatgcagcgacaaaactcaattggcaatcactgcagcaat
ggcaacaacaaggacagcaatgttatgtactacacaggacagatacacatgtttgagcca
aacgggaacgtcaacatgcagatgatggcatcatcagtagtggacgttcttcaatgtccc
tcagacagcactgagaccgccatgacctcaccgggagtaagcaaccaggtctctagtacg
gtggactcgtccaatgggacaggggcagaggagccccagattgactttgacaccatgctg
gatgacggggaccactccagcctgatgtcaggcaccatcagccccagtatcctccagagt
ctgtcccagacctcctccagactcaccaccccccggaactctgtcaccctgccctccctg
cccctccctgcagggggaagcaacatggccatcggcgatatgagctccctgctcaccgcg
cttgcagaagagaacaagttcctcaacatgatgtcataa
DBGET
integrated database retrieval system