Oncorhynchus keta (chum salmon): 118370993
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Entry
118370993 CDS
T09424
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00514
Other types of O-glycan biosynthesis
oke04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
118370993
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118370993
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118370993
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
118370993
Glycosyltransferases [BR:
oke01003
]
Glycan extension
O-Glycan
118370993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
118370993
NCBI-ProteinID:
XP_035612174
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All DBs
Position
2:11152901..11195863
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AA seq
410 aa
AA seq
DB search
MHVSSMGVSKLCFLFSLALCALLLLIPTLQPSQHQGDLPRPRPRAHNKPARHPGRLVVPL
QTDMGKVTVGRNGIDGDSMGQSTPRETKRTVDGDWVYTARQADTQGAGKHIDSQTGSEGD
FLHRTGGVTGAGGSRPRNPLELKDIFIAVKTTRKYHKSRLDLLFQTWVSKAKEQTFIFTD
GEDQELRRRAGANVINTNCSAAHTRQALCCKMSVEYDKFIESQRKWFCHMDDDNYVIVPS
LLKLLSSYHHTQDVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKM
SPWASLGNFISTAEKIRLPDDCTMGYIIEALLEVTLTHTHLFHSHLENLQRLPTDTVLEQ
VTLSYGGFENRRNVISIGGAFSLVEDPTRFKTVHCLLYPETDWCPSMGHH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtttcctcaatgggtgtcagcaagctctgcttcctgttctccctggctctctgt
gccctgttgctcctcatccccaccctccagccctcacagcatcagggggaccttccccgg
ccccggccccgggcccacaacaaacctgcccggcaccctggacgtctggtggttcctctc
cagacagatatggggaaagtgacagtggggcgtaatgggattgatggtgactctatgggg
cagagtacaccaagagagaccaagaggactgtggatggggactgggtgtatacagctcgt
caagctgacacccagggcgctgggaagcatatagactctcagacagggtcagagggggac
ttcctccacagaactgggggtgtgacgggggctggagggtctcggcccaggaatcctctg
gagctgaaagacattttcatagcggtgaagaccaccaggaagtaccacaagtccagattg
gatctgctgttccagacctgggtgtccaaagccaaagaacagacctttatattcacagat
ggggaggatcaggagctgaggaggagagcaggggctaacgtcatcaacaccaactgttca
gcagcacacacgcggcaggccctgtgctgtaagatgtctgtggaatacgacaagttcatc
gagtcacagaggaagtggttctgccatatggatgatgataactatgtgattgtacccagt
ctgctgaagctgctgtcctcctaccaccacacgcaggatgtttatctgggccggcccagc
cttgaccaccccatagaggccgcagagagggtcaagagtgacggatctgtgtcagtcaag
ttctggtttgctacaggaggagcagggttctgtatcagtcgtggtctggccctcaagatg
agtccatgggctagtctgggcaacttcatcagcacggcggagaagatccgtctccctgac
gactgcaccatgggttacatcattgaggcgctgctggaggtgacactgacacatacacac
ctcttccactcccacctggagaacctgcagaggcttcccacagacaccgtgctggagcag
gtcactttgagctacgggggatttgagaacaggaggaatgtgatcagcattggaggagcc
ttctctctggtggaggacccgacacggtttaagactgtccactgcctcctctacccagag
actgactggtgtcctagtatgggtcaccattga
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