Oncorhynchus keta (chum salmon): 118374088
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Entry
118374088 CDS
T09424
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118374088
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118374088
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
118374088
NCBI-ProteinID:
XP_035616340
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Position
5:complement(25909150..25972891)
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AA seq
1272 aa
AA seq
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MAGGRGQEYVMTDKEHEGGEGRTGRRKSDKDQSWIPNIIRKRVCTTFVEDSLSNGALCQC
GGMRETHGSNATGDYFGAAIVSQWDSSQHSSEYPTDAFGELEFAGAGRRHSHFLRLSCDT
PPQIVYSLMTAHWGLPSPNLVVSVVGSGGCEKVKPWVREVLRQGLVKAAQSTGAWIVTGG
LREGVGRCVGEAVRDHAAAASCLSQKKVIAVGVAPWGLVHNREQLVNTQGSFPARYYVQN
ASRDSCCLDNNYQAFLLVDDGSVGRRGGETAFRSMMEDYISHQRTGIWDSGSIEIPVLCM
LISGEAAMLKRVDLSLRKATPWLVLNGSGPAADLICELLDALSAVPMSCTSPPPEGEGSE
SPSAELRERTRERVKRHFPAEADREKLVDRALSIYQNRDLITVFHGEQDSPDDFDTVLLK
ALVRASKRVSSDASEYTEELKLAVAWNRVDIANSELFNGDIQWRYEDLEDSMTDALINNK
PQFVRLFNENGLNILDYLTYQRLEGLYRSLSNSSLAYMLLQRHLTERQSLARSLPTVPCS
PDEPKPLKSPISGPSSAKELSLYEVSRLLWDILGDVCQPFYYGPLGLDQSTSTWRTLKQV
NKLLLGDCLYREQRCVHPWASLFIWAVLQNRSEMAVYFWEMAGESVLSALAGCKILRELS
KLESETAAKLSLKELAQKFENLANEVFSECYQSSESRSFNLLIRQSLVWGEATCLEMATA
ADARLFFSHDGLQSLLSQIWWGDMERSTEVWKLILSFFLPPLIYTNLISFREPEEEGKTE
QVPHGQDTDSLDGVDATMVSLTDTMDEDAEEYAAVRVNMKGAPSSNPKRPFVLLRWREFW
FAPVTAFLGNVLMYFLFLSLFAYVLLLDFKHPPPHGPSTLEFVLYFWVFTLVCEEFRQTF
FRGSTTLYQRMKLYIQDMWNKCDITAISLFALGMCCRMFPWSYEFGRAVMAVDYMVFTLR
LIHIFAIHKQLGPKIIIVEKMMKDVFFFLFFLAVWLMAYGVANQALLYSYDPRPGWIFRR
VFYRPYLHIFGHIPIHEMDADKLEEGIECTNNVTLIEAGAEPCTSTYANWLVVILLVIFL
LVTNILLVNLLIAMFSYTFSKVQEHSDTHWKFQRYNLIAEYHSRPCLAPPFIILSHLHLF
IKRHIRRIPSVKIKHFVLDIRGRQASRLNTWEAIQKENILSAQNKREREKDSERLKRTSV
KVDSVLKQMAEIRDHGHRLRILEAELEYCSSALSWMVQALSQSNLIKPTRPPPALRDLTL
QLADPSLENNEI
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagggagggggcaagagtacgtcatgacggataaagagcatgaaggaggcgaa
ggaagaacgggaagaagaaaatccgacaaagatcagagctggatccccaacatcatcagg
aagcgagtatgcaccacattcgtagaggactctttaagcaatggggcattgtgtcagtgt
gggggcatgcgggaaactcacggctccaacgctacgggagactatttcggagccgccatc
gtcagccagtgggacagttcccagcactcctcagagtaccccaccgacgccttcggagag
ctggaattcgcaggggctggcaggagacacagccatttcttgcgactgtcatgcgacacc
ccacctcagatcgtgtacagtctgatgacggcccactgggggttgccctcccccaacctg
gtggtttctgttgtggggagtggggggtgcgagaaggtcaagccctgggtcagggaggtg
ctgagacaggggctggtcaaggcggcacagagcaccggggcgtggatagtgacggggggg
ctgagggagggggtgggtcgttgtgttggggaggcagtgcgagatcatgctgctgctgct
tcctgtctctcccagaagaaagtcattgctgtgggcgtggccccctgggggctggtgcac
aacagagagcagctagttaacacacagggtagtttccctgcgcggtattatgtccagaac
gcatctcgtgactcgtgctgcctggataataactaccaggccttcctgcttgtggatgat
gggagtgtaggccggcggggaggggaaacggccttcaggtccatgatggaagactacatc
tcccaccagcgcaccggcatctgggatagtggcagtatagagattcctgtgctgtgtatg
ctcatctcaggggaagctgccatgctgaagagggtggatctctctctgaggaaggctact
ccctggctggtgttgaatggttctggtccagcggcagaccttatctgtgagctgctggat
gccctgtcagctgtgccgatgagctgcacctctcccccgccagagggtgaggggagcgag
agccccagcgcggagctgcgcgaaagaacccgtgagagggtcaagaggcacttccctgcc
gaggcagaccgggagaagcttgtggacagggctctgagtatctaccagaacagagatctg
atcacagtgttccacggggagcaggacagtcctgatgattttgacactgtgctactgaag
gctctggtcagagccagtaaacgtgtgtccagcgacgccagtgagtacacagaggagcta
aagcttgcagtagcctggaacagggtggacatcgctaacagtgaactcttcaatggagac
atccaatggaggtacgaggacctggaggactccatgacggacgcactgatcaacaacaag
ccccagtttgtacgtctcttcaacgagaacggcctcaacattctggactacctgacctac
cagcgtctggagggtctgtaccgctcgctgtccaacagctctctggcctacatgcttctc
cagcgacacctcacagagaggcagagcctggccagatcccttcccactgtcccctgctct
ccggacgagccgaaacccctcaagagccccatatcaggaccctcctctgccaaagagctc
agcttgtatgaggtgtcgcggctactatgggacatcctgggagatgtgtgtcagcccttc
tactacggtcctctgggtttggaccagagcaccagcacctggagaacactgaagcaagtc
aataagttgttactgggggattgtctgtatagggagcagcgctgtgtccatccctgggcc
tctctgttcatctgggctgtgctgcagaaccgcagcgagatggctgtctacttctgggag
atggcaggggagtctgtcctcagtgctctggcaggctgtaagattctgagggagctgtct
aagcttgagagtgagacggcagccaagctctctctgaaggagctagcacagaagtttgag
aacttggccaatgaagtgttcagtgaatgctatcagagcagtgagagtcgctctttcaac
ctccttataagacagtctctggtgtggggcgaagctacctgtctggagatggccaccgca
gccgatgcccgcctcttcttcagtcacgatggcttgcagtctctgctgtctcagatctgg
tggggagacatggagaggagcacagaagtctggaaactgatcctctccttcttcttaccc
cccctcatctacaccaacctcatcagcttcagggaacctgaggaagaggggaagactgag
caggtgccccatggtcaagacacagacagtctggacggagtcgatgccaccatggtctcc
ctcaccgacacgatggatgaggatgctgaggaatatgcggctgtaagggtcaatatgaaa
ggtgccccctcctccaatcctaagaggccgttcgtactgctacgctggagggagttctgg
ttcgcgcccgtcacggcgtttctaggcaacgtgctgatgtacttcctgttcctcagcctg
tttgcttacgtcctattgttggacttcaagcacccgccccctcacggcccgtccacctta
gagtttgttctctacttctgggtcttcaccctggtctgtgaggagtttcgacagacattc
ttcaggggcagcactactttatatcagaggatgaagctctacatccaggacatgtggaat
aagtgtgacatcacagctatctcactctttgcactgggcatgtgctgcagaatgttccca
tggtcctatgaatttggccgggctgtgatggctgtggactacatggtgtttaccctccgt
ctcatccacatattcgccatccacaaacagctgggacccaagatcatcatcgttgaaaaa
atgatgaaggatgtcttcttcttcctcttcttcctggcggtgtggctcatggcctacggc
gtagccaatcaggcgctgctctactcctacgatcctcgtcccggttggatcttccgccga
gtgttctacaggccatacctgcacatatttggacatatccccattcatgaaatggatgct
gataaactggaggaggggatagagtgcaccaataacgtcaccctgatcgaggcaggggcc
gagccctgcacgagtacctatgctaactggctggtggtcatcttattggtcatctttctg
ctggtcaccaacatcctgttggtcaacctgctcattgccatgttcagttacacattctcc
aaagtgcaggagcacagcgacacccactggaagttccagcgctacaacttgatcgcagag
taccactctagaccctgtctggctccacccttcatcatcctctcccacctccacctcttc
atcaagagacacatccgcaggatcccctctgtcaagatcaaacactttgttctggatatc
cgtggcaggcaggccagtagactgaacacatgggaggccatccagaaggagaatatactg
tctgcccagaacaaacgagagcgagagaaagactccgagagactcaaacgcacctctgtc
aaggtggacagtgtcctaaagcagatggcagagatccgggaccacggccacaggctaaga
atactggaggcagagttggagtactgttctagtgccctctcctggatggtgcaggctctc
tctcagagtaacttgataaagcccacacgtcctccgccagctctccgagatctaactctc
caactagctgacccaagtctggagaataatgaaatctag
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