Oncorhynchus keta (chum salmon): 118375490
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Entry
118375490 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
oke04210
Apoptosis
oke04217
Necroptosis
oke04510
Focal adhesion
oke04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118375490
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118375490
04217 Necroptosis
118375490
09144 Cellular community - eukaryotes
04510 Focal adhesion
118375490
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118375490
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oke01002
]
118375490
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118375490
03029 Mitochondrial biogenesis [BR:
oke03029
]
118375490
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118375490
Peptidases and inhibitors [BR:
oke01002
]
Peptidase inhibitors
Family I32: IAP family
118375490
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118375490
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118375490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
UBA_BIRC2-3
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
118375490
NCBI-ProteinID:
XP_035617957
LinkDB
All DBs
Position
4:74182555..74189735
Genome browser
AA seq
463 aa
AA seq
DB search
MSGPGRDSDLESDHAVDWSMMDMRLDSFRGSPLAQQVSSERLARAGFYFTGQADKVRCFS
CHKTVENWRGGDAPVERHAEVSPSCKFLSCTHRSRVNSLQGAMLTNETSYNEDAEDMEFR
LRTGEVVDDTTYPMAPHMASEDSRFNTFGPWPSTSPVRPRELAQAGLFYLGEGDQVQCFC
CGRMLKGWEAGDTAWGEHSKHYPYCFFILGHDVGNLPSQRGREVEETRPCLGPRVPMQSF
EERLGSFAGIQHHPIDHERLARAGFYNTGAPDHVGCFRCGGGLKGWQQDEDPWEEHAKHY
PGCSFLLAEKGQEFVSSVQLQGPGRNNAASSHLNGCSSRETEVLQSANAQKAVEMGLEPA
LVERTIQERIRRDGTGYSTLETLLQDCFNRDPDSDTENHDEGPLEKLRKLQREKQCKVCM
DRDICIVFIPCGHLVVCKECSEALDKCPICCCAITQKLKTYIS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggacccgggagagacagtgatctggagtcggaccacgcagtagactggtccatg
atggacatgcggctggactcgttccggggttcccccctggcccagcaggtgtcatcggag
aggctggcccgcgctgggttctacttcacgggacaggccgacaaggtgcgctgcttcagt
tgccacaagactgtagagaactggcgtggaggtgacgcacccgtggagaggcacgcggag
gtctcccccagctgtaagttcctgagctgcacccatcgatccagggttaactctcttcaa
ggtgccatgctgaccaatgaaacctcatacaacgaagacgctgaggacatggagttccgc
ctgaggacgggagaggtggtagacgataccacctaccccatggccccgcacatggccagc
gaagactcccggttcaacaccttcggcccgtggccctccacatccccggtccgacctaga
gagctggcccaggcggggctcttctatctgggggagggagaccaggtgcagtgcttctgc
tgtggaaggatgctgaagggctgggaggctggggacactgcgtggggagagcactccaaa
cactacccctactgcttcttcatcctggggcatgatgtggggaacctcccctctcagagg
gggagggaggtggaggagaccaggccatgcctgggtcctcgggtccccatgcagagcttt
gaggagaggctaggcagctttgcaggaatccagcaccaccctattgaccacgagaggctg
gccagagcaggcttctacaacacaggtgcaccagaccatgtggggtgtttccgctgtggt
ggaggtctgaagggctggcagcaggatgaggatccctgggaggagcacgccaaacactat
cctgggtgcagttttctactggctgagaaaggacaggagttcgtcagcagcgttcagcta
caaggtcctggccggaacaatgctgcttcaagtcacctaaatggatgttcaagtcgtgag
actgaggtgctgcagtcagccaatgcccagaaggcggtggagatgggtctggagcctgcc
ttggtagagaggacaatacaggagaggatacgcagggatgggacaggttactccaccctg
gaaactctgctgcaggactgctttaacagagatcctgacagcgacacagagaaccatgac
gagggtccccttgagaagctacggaagctgcagagggagaaacagtgcaaagtgtgtatg
gacagagacatctgcatcgtcttcattccctgtgggcacctggtcgtctgcaaggagtgt
tccgaggcccttgacaagtgtcccatctgctgttgtgccatcacacaaaagctcaagaca
tacatctcctaa
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