KEGG   Oncorhynchus keta (chum salmon): 118375714
Entry
118375714         CDS       T09424                                 
Name
(RefSeq) lysine-specific demethylase 2A-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    118375714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:oke03000]
    118375714
   04121 Ubiquitin system [BR:oke04121]
    118375714
   03036 Chromosome and associated proteins [BR:oke03036]
    118375714
Enzymes [BR:oke01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     118375714
Transcription factors [BR:oke03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    118375714
Ubiquitin system [BR:oke04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     118375714
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118375714
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     118375714
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like SR-25 JmjC F-box Cupin_8 DUF7885 New_glue LRR_8
Other DBs
NCBI-GeneID: 118375714
NCBI-ProteinID: XP_035618202
LinkDB
Position
4:complement(54164734..54176582)
AA seq 1329 aa
MEDQNPRYSKRLRTGTRRRYQDDGISDDEIEGKRTFDLDEKLQSDRFNSYLVKHMDGKDF
TFEYIQREGLRDPIVFEKKDGLGLEMPDSDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMS
MAQWRRYYETPPSERDKLYNVISLEFSHTKLENLVKRPTSVDLIDWVDNMWPRHLKERQR
DSTNSIIEMQYPKVQKYCLMSVQGCFTDFHVDFGGTSVWYHILRGGKVFWLIPPTPQNLE
LYENWVLSGKQGDIFLGDKAQDCQRIELKQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYNIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTNTSHLTPDFQKHSLGVG
LTREDSENKLNGHVKNGTEEKKEGDNDKEEKEESETKVKMEESDDDSFPLPGATKPGVRV
NLTPLELEGLWNLLGKLEELPTHKKCVPAGIRNAPALLHDIRALLEEHCNDDPKLSYTGK
PIVKWPKRPSWYQPPPPSVVYRPRLAMPHKAVVPRPAKPTSISALRRRRVRCKHCAACQR
KECGECNFCKDMRRFGGPGRMKKGCMMRQCLAPGLPNSAVCALCGAGQGKQECSDESPST
TLMECSNCAQIAHPDCIKVPGEGRINKDLPSCWECPKCYQGKEGSSSESSSSEDSTASTG
SLSTSNHAHREGIGDGEAGSGVRKSRRGRPPLTSSLSQRIVPPPSQRLLLQQQQNRKRAG
ALELRLRKRIKLERSKILHSKQTLSLERSPKLLCSQGLAHLQRGVSSRLRSPVGRLSRGR
GSFRGSPYRSPTGARLHPHQLSLSLAPAGRGEGNRERGSGRGVRLRGGAAGRGRRGQRHG
GAEEESDSSSSSSSSSSTSSSSSSSSGSDEERENGVRARRNKENRPQRRGRRAAKEDEEK
EQSEESNQNGEEEMDEDWGEGGQAQTEPPVLVVSDLSDELMKGSYLTVTLQPSRAKRDPG
AIVPKLEAAVAPRPAPPGQSCIQRKNLARPPLRNHAPDPYAAPSHSDTHTRGSHPDERRM
RPGRPERTDNSASSSSPVPPLRLPLSALQDGGREVANGGSEPGCEREVWVSVFRYLTRAE
LCVCMAVCKNWHKWSLDKRLWMRVDLSVSKSISPQALSGIIKRQPVTLDLSWTSISKKQL
TWLINRLPGLKDLMLSGCSWSSISALSSPGCPLLRTLDLRWADGIKDGQIRDLLNPPGCD
NRSQLRNMQSFRLAGLEISDSTLRLVIRHMPLLTRLDLSHCGALTDQSINLLTAVGSSTR
NTLTELNLGGCSKLTDSCLRYLRRLSCLSLLDLRECKSVSRKACEAFISELSVNTLYCLS
EDKLIQRIS
NT seq 3990 nt   +upstreamnt  +downstreamnt
atggaagaccaaaaccctcgttacagcaagcgcttgcgtacagggacgcggcggcgctac
caggatgacgggatctcggacgatgagattgaggggaagaggacgtttgacctggatgag
aagctgcagagtgacaggttcaactcttacctggttaaacacatggatggaaaagacttc
acattcgagtacatccagagggaggggctgagagaccctatcgtctttgagaaaaaagat
ggcctcggcttagagatgccagactctgatttcagtgtgagtgatgtcaagctgtttgta
ggcagtcggaggatggttgacgttatggatgtgaccactcagaagggcatcgagatgtcc
atggcccaatggcggcggtactacgagaccccgccctcggagcgagataagctctataac
gtcatcagcctggagttcagtcacaccaagctggagaacctggtgaaacgacccacctcg
gtggatttgatagactgggtggacaacatgtggccaaggcacctaaaggaaagacagaga
gactcaaccaactctataatagaaatgcagtatcccaaagtgcagaagtactgtctgatg
agtgttcagggctgcttcacagacttccacgttgactttggcggtacgtcggtctggtac
cacatcctgcgggggggaaaggtgttttggcttatcccgcccacaccccagaacttggag
ctgtatgagaactgggtgttgtcagggaaacagggagacattttcctcggggacaaggcc
caggactgtcagaggatagaactgaagcagggatacaccttcatgatcccctccggctgg
atccatgctgtgtacacccctgaggacacactggtgtttggaggaaacttcctccacagc
ttcaacatccccatgcagctcaacatctacaacattgaggaccgcacacgagtcccggct
aagttccgataccccttctactatgagatgtgctggtacgtgttggagagatacctctac
tgcctgaccaacacctcccacctcacccccgacttccagaagcactcacttggtgttggt
ctgacccgtgaagactcggagaacaaactcaacggccacgtgaaaaatggcacagaggaa
aagaaagagggagacaatgataaggaagaaaaggaggaaagtgagaccaaggtcaaaatg
gaagagtctgatgacgattccttcccccttcctggtgccactaagccgggggtgagagta
aacctgactcccctggagctggaggggctgtggaacctgctggggaagctggaggagctg
ccgacccacaaaaagtgtgtccccgcaggcatccgtaatgcccccgccctgctccatgac
atacgggctcttctggaggaacactgcaacgatgaccccaagctgtcttataccggaaag
cccattgtcaagtggcccaagaggccctcgtggtatcagccccctcccccctcagtggta
taccgtcctcgtctcgccatgccccacaaggccgtggtcccgcgccctgccaagcccacc
tctatctcggctctgagacgtaggcgcgtgcgctgcaaacactgtgcagcctgccagagg
aaggagtgcggcgaatgcaacttctgcaaagatatgaggaggttcggaggacccgggcgt
atgaagaagggctgcatgatgaggcagtgtctcgctcctggcctgcctaactcagcggtg
tgtgctctgtgtggagcgggccaggggaaacaggagtgttcagacgaaagcccctccaca
accctcatggaatgctccaactgtgctcagatcgcccaccccgactgcatcaaggttcct
ggggagggcaggatcaacaaggacctgcccagctgctgggagtgtcccaaatgttaccag
ggcaaagaaggctcttcatcggagtcgtccagcagtgaggacagcacggcttctacaggt
tctctctcaacgtcaaatcatgcccaccgagaggggataggagatggggaggcaggcagt
ggggtgaggaagagccgacgtggcagaccccctctaacatcctctctgtcccagcggata
gtgccccctccctctcagaggctgttactgcagcaacaacaaaacaggaagagagccgga
gcgctggagcttcgactcaggaagaggatcaaactggagcgcagcaaaatcttacattcg
aagcagacgttgtctctggagcgttctcctaagctcctgtgctcccagggtctagcccac
ctccagagaggggtgtcctctcgcctccgctcccctgttggcagactatcccggggccgt
gggtccttcagaggctccccttaccgctcccctacaggggctcgcctccatccccaccaa
ctctccctcagcctggcccctgcaggcaggggagaggggaacagggagcgagggagtggg
agaggagtacggctcagaggaggagcagcagggagaggaagaagaggacagagacacgga
ggagcagaggaagagagtgatagcagcagtagtagcagcagcagcagcagcaccagcagc
agtagtagtagtagtagtggtagtgatgaggagagggagaacggcgtgcgggccagacgg
aacaaagagaaccgaccacagagacgaggaagaagagcagccaaagaagatgaggaaaag
gaacagagtgaggagtccaaccaaaacggagaagaagagatggatgaagactggggggaa
ggaggacaggcacaaacggagccaccagtcctcgtagtgtcggaccttagcgacgagctc
atgaagggctcgtatctcacagtaaccctacagccgtcgagggccaaacgtgatccgggg
gccattgtcccgaaactggaggctgcagtcgccccccgccctgcccctcccggccagagt
tgcatccaacgcaagaacctggcccgaccacccctcaggaaccacgccccagacccctac
gctgcaccctcacactcagacacacacacacggggctcccatccagacgagaggagaatg
aggccaggcagaccagagagaacagacaacagcgcttcctcctcttctcctgttcctcct
ctacgcctccctctgtcggctttacaggatggggggagggaagtggcgaatggagggagc
gagccgggctgtgagagggaggtgtgggtatctgtcttccgttacctgactcgtgccgaa
ctctgtgtctgcatggccgtctgcaagaactggcacaaatggagcttggataagaggctg
tggatgcgggtcgatctgagcgtgtctaaatccatcagtcctcaagctctgtcaggtatc
atcaaacgccaaccagtcaccctggacctctcctggacctccatctccaagaaacaactc
acctggctcatcaaccgcctgcctgggttgaaggatctcatgttgtctggctgttcctgg
tcttcaatttcggctcttagctcgcccggttgccccctcctgcgcacgctggaccttcga
tgggccgacgggatcaaagacggacagatcagggacctgctcaacccaccaggttgtgat
aaccgcagtcagctgaggaacatgcagtctttccgtctggcggggctggagatcagtgac
tctactctgaggctggtgatcagacacatgcccctgctgacccgtctggacctgtcccac
tgtggagccctcactgaccagtccatcaacctgctcactgctgtgggctcctccacacgc
aacacactcaccgagctcaacctggggggctgcagtaagctgacagactcgtgtctgcgg
tacctccgccggctttcctgcctctccctgctggacctgcgggaatgcaagagtgtgtcc
cgcaaagcctgtgaggccttcatctctgagctgtctgtcaacaccctctactgcctatct
gaagacaaactgatccagaggatatcctag

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