Oncorhynchus keta (chum salmon): 118376214
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Entry
118376214 CDS
T09424
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1-like isoform X1
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00600
Sphingolipid metabolism
oke00604
Glycosphingolipid biosynthesis - ganglio series
oke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
118376214
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
118376214
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118376214
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
118376214
Glycosyltransferases [BR:
oke01003
]
Glycan extension
Glycolipid
118376214
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Glyco_transf_64
Motif
Other DBs
NCBI-GeneID:
118376214
NCBI-ProteinID:
XP_035618794
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All DBs
Position
28:14183924..14208145
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AA seq
531 aa
AA seq
DB search
MMRCLVQKKTYLVILSPLLLFALLRCWTQRATTTVDVGPGQSYKAQKVLKERLQNVQNGY
DNISYVLKESVAGRLAMNVCVCEADKKPAIDLPFAQVLFPRVWAQDDFHTAFQEAELAQV
KSRRQQEYNSFQQRYQTPADLLVIAEANSPLQYPTQGVEVRPLKTIIIPGLGLKEKHRQL
HTVNLTATLGTFDVLATVDGVSIRGQGVMHMTLSSRLLSTLNRQLQFVTYTNTLFHPRTA
DTVQFETDGHQSVFTIKVGHAVIPKLYHSGYTGEYNISSLVTIATKTFLRYDKLQDLIDS
IREFYPTVAIVIADDNEHPQPVMGPHIEHYIMPFGKGWFAGRNLAVSQVTTKYVLWVDDD
FLFTSNTRLENMVEILEKTTLDMVGGAVREATGYTATYRHTISVEEGGEEGDCIHIRNGY
HHVIEGFPNCVLADAVINFFMGRTDKMQQVGFDPRLNRVAHLEFFIDGLGILHIASCDDI
IINHASKIKLPWGKSHSEKAYAKFRYSSSDAVQIKNSLFYFKNRLKCMSSN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgctgcctcgttcagaagaaaacatacctcgtcattttatctccactgctacta
ttcgccctcctccgctgttggactcaaagggccaccaccactgttgacgtgggaccaggc
cagagctacaaggcacagaaggttctgaaggagaggctgcaaaatgtccagaatggttat
gacaatatctcatatgtcctgaaggaaagtgtggcagggcgtctggcaatgaacgtgtgt
gtgtgtgaggcagataagaagcctgccatcgacctgccttttgcccaagtgctgttcccc
cgtgtctgggcccaggatgacttccacacagccttccaggaggcagagctggctcaggtg
aaaagtcgcaggcagcaggagtacaacagcttccagcagaggtaccagactcccgcagac
ctccttgttatagcagaagccaacagtcccctacagtaccctacccagggggtggaggtt
cgccctctcaagactatcattatccctgggttggggctgaaagaaaagcatagacaactt
catacagtgaatctgactgctaccctggggacatttgatgtgttagccaccgtagacggg
gtctccattagaggacagggagtgatgcacatgactttgtccagtagactcctctccact
ctgaacagacagctacagtttgtcacctacaccaacaccttgttccaccctaggacggct
gacacagtgcagtttgagactgatggacaccagtccgtttttaccataaaggttggacat
gctgttattcccaagctctatcactcaggttacactggagaatacaacataagctcactt
gtcaccatagctaccaagacatttctgcgttatgacaaactgcaggatctgattgacagc
atacgggagttctatcccactgtcgccatagtgatagcagatgacaacgagcacccccag
ccagtgatgggtccacacattgaacattacattatgccgtttgggaagggttggtttgca
gggagaaatctggctgtctctcaggtgaccaccaagtatgtgctgtgggtggacgacgac
ttcctcttcacctccaacaccagactggagaatatggtggagatcctggagaagaccacc
ctggacatggtggggggtgctgtgagagaagcgacaggctacactgctacttaccgccac
accatctcagtggaggaagggggtgaggagggggactgtatacacatcagaaatggatac
catcatgtcattgagggctttcctaactgtgtcctcgccgacgctgttatcaacttcttc
atggggaggacagacaagatgcagcaagtgggattcgatcctcgtctgaaccgtgtggct
catctagagttcttcatcgacgggcttgggatcctccacatagcttcctgtgatgacatc
atcataaaccatgcatctaagatcaagttgccatggggcaagtcgcacagtgagaaggcc
tacgccaagttccgctactcctcatcggatgctgtccaaatcaaaaattcccttttttac
ttcaagaacagactcaaatgcatgtctagtaactga
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