Oncorhynchus keta (chum salmon): 118377523
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Entry
118377523 CDS
T09424
Symbol
ptprc
Name
(RefSeq) receptor-type tyrosine-protein phosphatase C isoform X1
KO
K06478
receptor-type tyrosine-protein phosphatase C [EC:
3.1.3.48
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
oke05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118377523 (ptprc)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118377523 (ptprc)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118377523 (ptprc)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oke04090
]
118377523 (ptprc)
Enzymes [BR:
oke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
118377523 (ptprc)
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
118377523 (ptprc)
CD molecules [BR:
oke04090
]
Proteins
118377523 (ptprc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
DSPc
Tc-R-P
PTP-SAK
Y_phosphatase3
PTPlike_phytase
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
118377523
NCBI-ProteinID:
XP_052320187
LinkDB
All DBs
Position
1:89082832..89181747
Genome browser
AA seq
1407 aa
AA seq
DB search
MAGLYGLKILLLCTGLIELAICAGDTTSKGSAATIPPTGTVAITNKPPSIPITPLNSQTA
SISTTPPPINEQDKSSISTPSPTQSTKNANDSTGPLLPNTTTTTATTTISPSLSSLTPTS
NILTQASSQATLSNATGDSSTSTSYPASTLNQTQTSNPASTHNQTQAFPTNTSTSQTQAL
PTNNSTSQTQALPTNNSTSPSLPTSTPPIHNQTSPASTLTSTTAIPTGSQTKPTPPKCTY
TVTPVIYGFQIDLKASTSDTYNILYQDESGQHMTVDHQTVNSTIVVSLKPCRNYTFTKIQ
PECELQRNSTLRTEKMDDLEFSTNTKPGYLCYVTKWNISDAEWNSPVITWEKDNCFKLLE
EHFCTNFTTNVAVPGGCSVNISKTIPITAEYSTVEHSPNLEYKNVLPVEIVWKNKPKNCG
PKDLDIHYTCEGNSGSINLTDLEPFQKYNCSGKITHNSKVISTKSIDVEIKCEVDITKTS
TNTNTSISLKWTNNSINCPRNTQLFHSCVSCRIETEVKDCYTTDELHYDFNQLQPFTNYI
CSIEPRYKDMSYDTLKKVSETILTAPGVPDEVGGKTSVTYTQNNAFTIICEELKPVQWKG
KEKWYIATITGSETKPQNKKKCNFTFADLGYLTDYTVQIVTYNGKYKSKPIETHITTRYN
DKAVIGFLVFLIILTSLALIFVLYKIYILQRKKSNNNDEQIELIQPSDEENLLNVEPIGS
EVLLDAYKRKIADEGRLFLQEFQSIPRIFSRNTVREAKKSCNQPKNRYVDILPYDYNRVQ
LTSGNGETGCDYINASFIDGFKESKKYIAAQGPKEETVGDFWRMVWEQQSSIIVMVTRCE
ESSRNKCAQYWPSPEREVEIFEGFVVKLNREEHCPDYIIRHLSLTNKREKSAEREVTHIQ
FTSWPDHGVPGEPHLLLKLRRRVNAFKNLFSGPIVIHCSAGVGRTGTYMGIDAMMEGLEA
EGRVDIYGYVVKLRRQRCLMVQVEAQYILIHQALIEHNQFGETEISLAELHPTLGTLKQR
DPGNEPTLLEAEFQRLPRYKNWRTFNTGINEENKKKNRSSSVIPYDYNRVLVKLEDESSH
DQDDDDDDDDSSDEEDEESTKYINATQIDGYWCQRSLIAAQGPLADTTGDFWQMVFQKKV
NTIVMLSDLTEGDQEFCSAYWGEEKKTFRDIEVELKATDTLPAYTTRSLQIRHPKRKDSR
QVKQYQFLKWAGRELPEKPQDLMDMIKNIKQTCGYGNSKAERILPVVVHCNDGSSRSGVF
CALWNIMDSAETEKLVDVFQVAKALRKERQGMIHSLEQYQFLYDAVEGSFPIQNGEVKQP
ATAPAAAADSIQVVNETKAEQPASATTATQQGAEVVKEAVESTPLVAGKEAGAAADGNED
EAKEPGSPTEKTPLEGSSNGPAVTLEV
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtctctatggactgaagatcctgctgctgtgtactgggctcatagagctggcc
atatgtgccggggatacaacttcgaaaggctccgcagcaacaatacccccaacaggaaca
gtagccatcaccaacaaacccccaagcattcccatcacacctttaaactctcagacagca
tccatctcaaccactcctccacccataaatgagcaagacaaaagcagcatctccactcct
tcacccacacaatccaccaagaatgcaaacgactccacaggccctttacttccaaacacc
acgaccacgacggccactacaaccatctcaccttcactcagttcgcttacccccacctca
aacatcctcactcaggcatcaagccaagctaccctttccaacgcaactggcgactcgagc
acaagcacttcttaccctgcaagcaccctcaaccaaacccagacatctaaccctgcaagc
acccacaaccaaacccaagcctttcctacaaacacctccacctctcaaacccaggctttg
cctacaaacaactccacctctcaaacccaggctttgcctacaaacaactcgacctctcca
tctttgcctacaagcactccacccatccacaaccaaacctcacctgcaagcaccctgact
tccactacagctatccccacaggcagccagactaaaccaacaccgccaaagtgtacatac
acggtcacgcctgtcatctatggctttcagattgacttaaaggcctcaacctccgacaca
tacaacatattgtaccaggatgaatcaggacaacacatgactgttgatcatcaaacggtg
aactccactattgtggtatcattgaagccttgcaggaactacacttttacaaagattcag
cctgaatgtgaactccaaagaaatagcactctgaggactgagaaaatggatgacctagag
ttttccaccaacacgaagccgggatatttgtgttatgtgacgaaatggaatatcagtgat
gctgaatggaacagtcctgttatcacctgggaaaaagacaactgttttaagcttttagag
gaacatttctgcacaaacttcacaaccaatgtagctgtgcctggaggttgcagtgtcaac
atcagcaaaactatacccataacagcagagtattctacagtcgaacactctcccaatctg
gaatacaaaaacgtactccctgttgaaatagtatggaaaaacaagccaaaaaactgtggc
cctaaagatctggacattcattatacctgtgaaggaaacagcgggtctatcaacttgact
gatttggaaccctttcagaaatacaactgtagtggaaagattactcacaacagtaaagtc
atcagtaccaagtccattgacgttgaaatcaaatgtgaagtggacattaccaaaacgtct
acaaacacaaacacctccataagccttaaatggaccaataacagcattaactgccccaga
aatactcagctatttcactcctgcgtttcctgtagaattgagactgaagttaaagattgt
tacaccacggatgaattacattatgattttaatcaattgcagccattcacaaattatatc
tgttcaattgagccaaggtacaaagacatgagctacgatacactcaaaaaagtgtctgag
acaatcctaactgcacctggagtacctgatgaggtgggggggaaaacgagtgtgacttat
actcagaacaatgcttttaccattatatgtgaggaattaaagccagttcagtggaaggga
aaagagaagtggtacattgcaacgatcactgggtctgagacaaaaccacaaaacaaaaaa
aaatgcaattttacatttgcggacctcggctatttaacagactacacagttcagatcgtt
acatacaatgggaaatacaagagtaaaccaatagaaacacacattactactcgctacaat
gacaaagctgtgattgggttccttgtgttcctcatcatcctgacatctctggctctcatc
ttcgttctctacaagatctacatcctgcagcgcaagaagtccaacaacaatgatgaacag
attgagctgattcagccaagtgatgaggagaacctgctgaacgtggagccaatcggatct
gaggtgcttctggacgcctacaagaggaaaatcgcagatgagggacgtcttttccttcag
gagtttcagagcatccccaggatcttcagccgcaacacggtcagagaggccaagaagtcc
tgcaaccagcccaagaaccgctacgtagacatcctcccatacgactacaaccgtgtccag
ctgaccagtggtaatggagagactggctgtgactacatcaacgccagcttcatcgacggt
ttcaaggagtctaagaagtacatcgcagctcaaggtcccaaggaagagacagtgggggat
ttctggaggatggtttgggagcaacagtcctctatcatcgtcatggtaacacgttgtgag
gagagtagcaggaacaagtgtgcccagtactggccgtctcctgaaagggaggtggagatc
tttgaggggtttgttgtgaagctgaacagagaagagcactgtcccgattacatcatccgt
cacctcagcttgaccaacaagagggagaagagtgcagagagggaggtgacccacatccag
ttcaccagctggccagaccacggcgtgccgggagagccacacctcctgctgaagctgagg
cgacgcgtcaacgccttcaagaacctcttcagtggacccatagtcatccactgcagcgct
ggagtggggagaacaggcacctacatgggcattgatgccatgatggaggggctggaggct
gagggcagagtggacatctacggatacgtggtcaagctacgacgccagagatgcctcatg
gttcaagtagaggctcagtacatcctgatccatcaggctctgatagaacacaaccagttt
ggagagacagagatctccctggcagagctgcacccaacactgggcacactcaaacagaga
gaccccggtaacgagcctactctgctggaggcagagttccagagacttccacggtacaag
aactggcggacattcaacacagggatcaacgaggagaacaagaagaaaaaccgctcctct
tctgttattccatacgactacaacagggttctggtgaagctcgaggacgagagcagccat
gaccaggacgacgatgacgatgatgatgactcttctgacgaagaggacgaggagtccacc
aaatacatcaacgccacacagatagatggttactggtgtcagaggagtctgatagcagcc
cagggtcctctagccgacaccacaggagacttctggcagatggtcttccagaagaaggtc
aataccatcgtcatgctgtcagacctcacagaaggagaccaggagttctgttcagcgtac
tggggagaggaaaagaaaaccttcagggacatcgaggtggagttgaaggccacagacacc
ctcccagcatacaccactcgcagtctccaaatccgtcaccctaagaggaaagacagtagg
caggtgaaacagtaccagttcctgaagtgggcgggacgagaactcccagagaagcctcag
gatttgatggacatgatcaagaacatcaagcagacctgtggctatggcaacagcaaggca
gagaggatcctgcctgttgtggtccactgcaatgatggctcgtctcgctccggggtcttc
tgtgcgttgtggaacatcatggacagtgccgagacagagaaactggttgacgtgttccag
gtggccaaggctctgcgcaaggagaggcaaggcatgattcacagcctggagcagtaccag
tttctgtatgacgccgtggagggatcgtttcctattcagaacggggaagtgaagcagcca
gccaccgccccagctgcagcagctgactccatccaggtcgtcaacgagaccaaagcagag
cagcctgccagcgctaccacagccacccagcagggggcagaggtggtgaaggaggcagta
gagagcactcccctagtggcagggaaagaagcaggtgctgcagcagatggcaatgaggat
gaggctaaagagccaggtagccctacagagaaaacccctctggaggggtctagtaacggc
cccgctgtcactctagaggtgtga
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