Oncorhynchus keta (chum salmon): 118377996
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Entry
118377996 CDS
T09424
Name
(RefSeq) LOW QUALITY PROTEIN: AP-4 complex subunit beta-1
KO
K12401
AP-4 complex subunit beta-1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118377996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118377996
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Others
AP-4 complex
118377996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
PDS5
Motif
Other DBs
NCBI-GeneID:
118377996
NCBI-ProteinID:
XP_052363530
EnsemblRapid:
ENSOKEG00005023678
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MAYLGDEHTVRELRRALSNPNVQADHLRYRNTIHRVIRVMSQGQDVSGLYSEMVKACATA
DIVQKKLVYVFLCAYASLNPELSLLVINTLRKDCSDHNPMVRSLALRNMCNLRLPGLSQY
VQQPLTVGLKDKAACVRRVAVLGWAKIYTLQPNTETDVAVVNELYGLLRDPDPVVMVNCL
RALEEILQEEGGVAINKPIAHHLLNRLKLCDVWGQSEVLAVLQRYRPRSEDELFDILSLL
DPALLSHHAPVMAATLRLFLSLCSTLPAVCMSALERARGPLLAAAGSTSRELRYAALCHI
QLLLRSEPGLMGEHYKRFFCGYAEPPYIKQNKMQVLVELVNDDNVAMVLDELRGYCTDVN
TETSQTAINAIGSIGRSYTDRCLAILTGLLGLKQEHITSAVLQTLRDLVWVCPQCGDTVC
SALEGWEDNIQDSQGRGALLWLLGVYGDRVTGAPYLLEDCIDGVRSEVLAEVKTELLTAT
LRLFLSRPAETQDMMGRLLVYCIEEEVDMCVRDQALLYYRLLHCGIEEVRQVLQGGRRSD
PSLGPLIGRPPEPISQWASSFNTLEPLTLGASTVGNSDPATPKPSTLTPNTLTSNAEAMT
PTTPGDPHLQDCSSGALSLSVSPALTPEEFQRLWLQLEKGACLEVCVACPVPRCSPEGLQ
VALQLVNIQTLAFTPPNTHPWRVYLYTHTSHISTKTPHTLILAELLHTGGEGEEEEDQAH
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcttacctgggcgatgagcatacagtgagggagctgaggagggctctgtccaaccca
aacgtccaagctgaccacctacgctacagaaacaccatccacagagtcatcagagtgatg
tctcaaggacaagatgtatctgggttgtacagtgagatggtgaaggcatgtgcaacggca
gatattgtccagaagaaactggtgtatgtgtttctgtgtgcctatgccagtctgaaccct
gagctgtctctgctggtaataaacaccctgaggaaagactgctcggatcacaaccccatg
gttcgcagcctggccctacggaacatgtgcaacctcaggctcccaggtctatcacaatat
gtgcagcagcctcttacagtgggactgaaggacaaggcggcgtgtgttcgtagagtggct
gtactgggctgggccaagatatacacattacaacctaacacagagacagatgtagctgta
gtgaatgagttgtatgggttgttaagggacccagacccggtagtcatggtgaactgtctc
cgggcactggaggagattctacaggaagaagggggcgtggctatcaacaaacccattgct
caccacctcctcaacagactgaagctatgtgatgtgtggggccagtctgaggtgctagcg
gtgctccagcggtatcggcctcgcagcgaagacgagctgttcgacatactatctctgtta
gaccccgcccttctctcgcaccacgcccccgtcatggccgccacgctccgcctcttcctg
tccctgtgttccacgctgcctgccgtgtgtatgtcggcacttgagagagcacggggcccc
ctcctggctgccgccggcagcacctcccgggaactacgctatgcagcgctatgtcacatc
cagctgctgctccgttctgagcctggtctgatgggggaacactacaaacgcttcttctgc
ggctatgctgaaccaccttacatcaaacagaacaagatgcaggtgctggttgagttggtg
aatgacgacaacgtggcgatggttctggacgagctgagaggatactgtactgacgtcaac
actgagacctcacagactgctatcaacgctataggtagtatagggaggagctacactgac
aggtgtctggccatcctcacgggactactggggctgaagcaagaacacatcacctctgcc
gtgctccagactctgagggacttagtgtgggtgtgtcctcagtgtggagacacagtgtgt
tcagctctggaaggatgggaggacaatatacaggacagtcagggtcgtggggccttgctg
tggctgctgggtgtctacggggacagggtgactggcgccccctatctgctggaggactgt
atagacggggtgaggagtgaggtgttagcggaggtcaagacagagctgctcactgcaaca
ctacggctgttcctgtccagacctgctgagactcaggacatgatgggacgactgctggtc
tactgtatagaggaggaagtggacatgtgtgtgcgtgaccaggccctgctgtactaccgg
ctgttgcattgtgggattgaggaggtccgtcaggtcctccagggtggacgacggtcagac
ccctctctggggcctctgattggacggccccctgagcccatcagccaatgggcatccagt
ttcaataccttggagcctctaaccctcggagcctctactgtggggaactctgaccccgcg
acccccaagccctccacactgacccccaacaccctgacctctaacgctgaagccatgacc
cctactacaccaggagacccccaccttcaagactgcagtagtggagctctgagtctgtct
gtgtctccagctctgacccctgaggagtttcaacgcctgtggctgcagctggagaagggg
gcgtgtctggaggtgtgtgtggcgtgtcctgttccccgctgttcccctgagggcctgcag
gtggcgctacagctggtcaacatccagacgctggctttcacccccccaaacacacacccc
tggagggtgtacctctacacacacacctcacacatctctacaaagacaccacacacactc
atactggcagaactactacacactggaggagagggagaggaggaggaggaccaggctcac
cggtag
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