Oncorhynchus keta (chum salmon): 118378058
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Entry
118378058 CDS
T09424
Name
(RefSeq) vascular endothelial growth factor receptor 1-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04020
Calcium signaling pathway
oke04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118378058
04020 Calcium signaling pathway
118378058
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118378058
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oke01001
]
118378058
Enzymes [BR:
oke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
118378058
Protein kinases [BR:
oke01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
118378058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
VEGFR-1-like_Ig-like
ig
Ig_2
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
V-set
VEGFR-2_TMD
Ig_4
C1-set
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
118378058
NCBI-ProteinID:
XP_052358850
LinkDB
All DBs
Position
4:complement(17624919..17711889)
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AA seq
1286 aa
AA seq
DB search
MIGYILVVLCGLAGSALAKGKLDREPKGKFSVPVLDVKSRQLVLEANQTLTIHCRGRWEL
SWAFPGGVARDQERMRLEDSRCGRQSQHYCSQLTLSSAQAQHTGSFRCRYSHRTLRQRAV
YVYVTDRQRPFVEVQNNSPDVVYMKERQPLVFPCRVTNPDATVSLVKFPDQELTPDQRNI
VWNSRQGFLIHSPTYFYIGLFSCKTSVNGTTHSLNYLTHRQVNKIMKVYLNSTSPVQSLQ
GESLAINCTVTAEWNSRVSISWDYPGQANRSAIVSRWIMASKFHMVFYSILSIPKLHRSD
RGLYICRVTSGPVSRETNVSVTVYDRPFIRLKPRQGAEVEAHAGQKSYRLSPKLRAFPAP
EVIWLKDGKVAAEECSRYHVDGNTLVIRDVVEEDAGKYTILVGIQEHRLYQNLTLSLVVN
VSPGIGEKAVSVQDPGSVPRGSRQALHCTSHGVPPPHIAWLWHPCPPKGLCVCPPSSSMW
SPVKERAPGTSTHNHILSVTHRQEVLQGKNKTVGVLLVAEAFVSGVYRCIASSSVGKDEL
DMPFYITDVPGGFSVSQEDEPREGGDLHLTCVANKHLYTNFSWQRVTDPAEATPPTPSLG
GVLSSGEATSPTPSLGGELSSGEFSDTLSLLLSNLTAGDSGTYRCSANHLLTGQNTHLDT
QVDVTVLEAPVLLQNLSDCSVNISSSVTLSCRAHGVPRPFITWYKDQHTLLQGSGIVIAQ
GGENLHIDRITVEDQGLYTCQATNERGSAESSAYIWVHNSSGGLSLEIPTLTCTCLVATL
FWLLLTLFIRKLKKPNSSSAKAEYLSIILDPGEGPLEEQCDRLQYDPGQWEFPRDRLKLE
KPLGRGAFGKVMQASAFGIDNSTGCRTVAVKMLKEGATPSDHKALMTELKILNHIGHHLN
VVNLLGACTKAGPLMVIVEYCRYGNLSTYLKSKRDVFLLNKDGKKRCFEEREGTEERGVS
KSPLFLEDLISFSFQVSRGMEFLASRKCIHRDLAARNILLSENKVVKICDFGLARDLYKD
LDYVRKGDARLPLKWMSPESIFDKVFTTQSDVWSYGVLLWEIFSLGASPYPGLNIDEEFC
HQLKEGTRMRSPEYSTPEIYSTMLACWEANPSDRPTFTGLVETLGDLLEARVQQDGKDYI
PLGTFLCGGRDPDSSVQRDSTESSLTDLHPHRLISLGYMNTRSTATLRTFEELPSKEPPG
PDDEQGDSGMVLPSEELKRLKWTSGAKSLTRSFTISTCRENLVPCMCNDITGLHDDEPPV
LPCDCDSEESCSPPPDYNSAFLYPSL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgattggctatatcctcgtggttctgtgtggattggctggcagtgcgctcgcaaagggt
aagttggatagggagcctaaggggaagttcagtgttcctgttctggatgtgaagagtcga
cagctggtcctggaggccaaccagactctgacaatccactgcaggggtcggtgggagctg
tcgtgggcattccctggaggtgtggccagagatcaggagagaatgagattggaagattct
cgttgtggtaggcagagccagcattactgcagccaactgacccttagctcggcccaggct
cagcacacaggatcgttccggtgtcggtacagtcatcggacgctcaggcagagagctgtc
tatgtctatgtcacagacagacagcggccatttgtggaggtgcagaataacagtccagac
gttgtgtatatgaaggagaggcagcctctggtcttcccctgtagagtcaccaaccctgac
gccactgtctcattggtcaagtttcctgaccaggagttgaccccagaccagaggaacata
gtgtggaacagcagacagggcttcctcatccacagccccacctacttctacatcggcctg
ttctcctgcaagacctctgtcaacgggaccacgcactccctcaattacctcacacacaga
caagtgaataagatcatgaaggtatatctgaacagtaccagtccagtgcagtctctacag
ggggagagtctggccatcaactgtactgtcactgcagagtggaacagcagagtgtccatc
agctgggactaccctggacaggccaacaggtcagccatagtcagtaggtggatcatggcc
agtaaatttcacatggtgttctacagtattctgtccatccccaaactccaccgctctgac
agggggctttatatctgccgagtgaccagtggaccggtcagtcgagagactaacgtatct
gtcacagtctatgaccgtccctttatccgtctgaagcccagacagggggctgaagtggag
gctcatgcaggacagaagtcataccgtctctcccccaaactacgagccttccctgcccca
gaagtcatctggttgaaggatgggaaggtggcagcggaggagtgttcccgttaccatgtg
gacgggaataccctggtgatccgtgatgtggtggaggaggatgctgggaagtacactatc
ctggttggaatccaggaacacagactctaccagaacctaacgctctctcttgtggtcaac
gtgagtcctgggataggggagaaggcagtgtcagtgcaggacccaggtagtgttccgcgg
ggtagcagacaagccctgcactgcacctcccacggagtcccccctcctcacatcgcatgg
ctctggcacccctgcccccccaaaggcctgtgtgtgtgtcccccgtcctcctcaatgtgg
agccccgtaaaagagagggcccccggcacttccacacacaaccacatcctgagtgtcaca
cacagacaagaagtcctccaggggaagaataagaccgtgggggttttgctggttgctgag
gcgtttgtgtctggcgtgtatcgctgtattgcctctagttctgtgggcaaggatgagctg
gacatgcccttctatataacagacgtcccaggaggcttcagtgtgagtcaggaggatgag
ccaagggagggaggagacctacacctcacctgcgtagccaataagcacctgtacaccaat
ttttcatggcaaagggtgactgacccagcagaggccacacccccgaccccctccctgggt
ggtgtactgtcctcaggggaggccacatccccgactccctccctgggtggtgaactgtcc
tcaggagagttttctgatactctgagtctattgcttagcaacctgacggcgggggattct
gggacctaccgctgctccgccaatcacctgctgacgggacagaacacacatctggacaca
caggtggacgtcacagtactggaggctccggtgctgttacagaatctgtctgactgcagc
gtgaacatcagcagctcagtgacactcagctgccgcgcccacggagtgccacgcccattc
atcacatggtacaaggaccaacacacactgcttcagggatcaggtatcgtcatagcacaa
ggaggcgagaacctccacattgaccgaatcacagtggaggaccagggtctgtacacctgc
caggcaaccaatgagagaggctctgctgagagctccgcctacatctgggttcacaactca
tcaggtggcctgtctctggagatccctactctcacctgtacctgtctggtggccactctc
ttctggctgcttctcactctcttcatacgtaaactcaaaaagccaaactcttcgagtgcc
aaggctgagtacctttcaatcatcctggacccaggggaggggcctctggaggagcagtgt
gataggctacagtacgacccaggccaatgggagttccccagagaccgcctcaaactggag
aaacctctgggccgtggggcctttgggaaagtcatgcaggcgtctgcctttggcatcgac
aactctacaggctgcaggactgtggctgtcaagatgctcaaggagggggctactcccagt
gaccacaaggctctgatgacagaactgaagatcttgaaccacatcggccaccacctgaat
gtggtcaacctgctgggagcctgcaccaaggcagggcctctcatggtgatagtggagtac
tgtaggtatggaaacctatccacctacctgaagagcaagagagacgtgttcctgctcaac
aaagatgggaagaagaggtgtttcgaggagagagagggcacagaggagaggggtgtctcc
aagtctcctctgttcctggaggatctcatctccttcagtttccaagtgtctcgaggcatg
gagttcctcgcctctcgcaagtgtatccaccgtgacctggctgccaggaacattctgctg
tctgagaacaaagtggtgaagatctgtgactttggtctggccagagacctctacaaagac
ctggactatgtccgcaagggagacgcaaggctgccattgaagtggatgtccccagagtcc
atctttgacaaggtgttcacgacccagagtgacgtgtggtcctatggagttctgctctgg
gagatattctctctgggagcctctccgtacccaggcctgaacatagatgaggagttctgc
caccaactaaaggagggaacacgcatgcgatccccagagtacagcactccagaaatttac
agcaccatgctggcatgctgggaggctaacccctcagaccgccccaccttcactggctta
gtggaaacactgggagacctgctggaagcacgggttcaacaggatgggaaggactacatt
cccctgggcacgttcctgtgtggagggagagacccagacagcagcgtccagagagactcc
acagagagctccctgactgacctgcatccacacagactcatcagcctaggctacatgaac
accaggagcacagcgacactcaggacctttgaggaactgcccagcaaggaaccgcctggc
ccggatgatgagcagggagacagcgggatggttcttccctctgaggaactcaaacgcctc
aaatggaccagcggcgccaagagcctcacaaggtcctttaccatcagtacgtgcagggag
aacctggtgccctgcatgtgtaatgacatcactggtctccatgacgacgagccgcctgtc
ctcccatgcgactgtgactccgaggagagctgttcccctccacccgactacaactctgcc
ttcctctacccctccctctga
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