KEGG   Oncorhynchus keta (chum salmon): 118378355
Entry
118378355         CDS       T09424                                 
Name
(RefSeq) LOW QUALITY PROTEIN: single-stranded DNA cytosine deaminase
  KO
K10989  activation-induced cytidine deaminase [EC:3.5.4.38]
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04672  Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:oke00001]
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    118378355
Enzymes [BR:oke01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.38  single-stranded DNA cytosine deaminase
     118378355
SSDB
Motif
Pfam: APOBEC2 NAD1 APOBEC_N NAD2 SNAD4 APOBEC4_like APOBEC_C APOBEC3 APOBEC1 APOBEC4
Other DBs
NCBI-GeneID: 118378355
NCBI-ProteinID: XP_052348631
LinkDB
Position
34:76405535..76409924
AA seq 206 aa
MINKFDSVLLAQKKFIYHYKNMRWAKGRHETYLCIVVKRRVGPNSLSFDFGHLRNRSGCH
VEVLFLRLMEAGALCPCLWGYGAPDSVGLCYSVTWFCSWSTCSDCSYRLAQFLSQTPNLR
LRIYVSRXGQQCLRMLQRAGXITVMNYEDYFYVVXCWQTFVACRQRVFKAWDGLHQNSVQ
LARKLNDILQPGEAEYWGDAFELLGL
NT seq 621 nt   +upstreamnt  +downstreamnt
atgatcaacaaatttgacagtgttctgttggcccagaagaagtttatctaccactataag
aacatgcgctgggccaagggccgacacgaaacctacctgtgcatcgtggtcaagaggcgg
gtgggaccaaactcactctccttcgactttggacacctgcgcaaccggtccggctgtcat
gttgaggttctgttcctgcgcctcatggaagcaggcgccctgtgtccctgcctgtggggt
tatggagctccagacagtgtgggactgtgttactcagtcacctggttctgttcctggtcc
acctgctcagactgctcctacaggctggcccagttcctcagccagacccccaacctccgc
ctcaggatctacgtctccaggnnaggacagcagtgtctccgcatgctgcagagagccggg
nngatcactgtcatgaactatgaagactatttctacgttgtctaatgttggcagaccttt
gtagcttgcagacagcgtgtgtttaaggcctgggacggactgcatcagaactctgttcaa
ctggccaggaaacttaatgacatcctccagcctggtgaggcagaatattggggagatgct
ttcgagctacttggactgtga

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