Oncorhynchus keta (chum salmon): 118378784
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Entry
118378784 CDS
T09424
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118378784 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oke01007
]
118378784 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118378784 (iars1)
Enzymes [BR:
oke01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
118378784 (iars1)
Amino acid related enzymes [BR:
oke01007
]
Aminoacyl-tRNA synthetase
Class I (U)
118378784 (iars1)
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
118378784 (iars1)
Prokaryotic type
Other AARSs
118378784 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
118378784
NCBI-ProteinID:
XP_052330543
LinkDB
All DBs
Position
21:complement(54913139..55046202)
Genome browser
AA seq
1435 aa
AA seq
DB search
MVEPVPESIHFPSEEKRILQLWKDKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLDIKGPDDVAKMGIAEYNRQC
RMIVMRYANEWENSVTRMGRWIDFKNDYKTLYPWFMETVWWVFRQLYDKGLVYRGVKVMP
FSTACNTPLSNFESNQNYKDVQDPSVIVNFPLLEDENVCLIAWTTTPWTLPSNLALCVNS
ELQYVKVKDNSTGKVYIMMEARLVALFKTEEEYTIMDKFPGKTLKGKKYKPLFDYFRKCG
ETGAFQVVMDSYVREEEGTGVVHQAPYFGADDYRVCMENNICQRDQAPVCPVDSSGCFTD
EVTDFVGQYVKDADKNIIKWLKERGRLVNSGSFKHSYPFCWRSDTPLIYKAVPSWFIRVE
HMVEKLLANNDKCYWVPEFGWRSVGSESYSRIDTRSSGSAAPETCSDQLLSVIHTTPTTE
PTTTEPTTTTTEPTTTTTEPTLTTEPTLTTEPTTTEPTPTTEPTTTTTEDPPPPQRPPPP
TTRPTTEPTPTTEPTTTPPPQAHHHHRDHHQSPPPPQAHHHRPTTEPTTTTGPPQSPPPP
GTPCLMSLPLSSLSPHSLCPSLSLSLSPHSLLALSLSLSSLSLSASLSLPSLAPSSPSFP
LSLPLSFHSIDQLTIPSRCGKGVLRRVTEVFDCWFESGSMPYAQAHYPFENRKEFEDTFP
ADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQKMSKRKKNYPDPGL
VVENYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAYRFLVQNVQRLHKE
DGISFLYNEATAKRSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVVPKLVKFVDMLTNW
YVRTNRRRFKGESGTEDCLGALENLFSVLFSMCRLMAPFTPFITEMMYQNLRHLIDPTSV
EEKDSSSIHYLMLPLVRESLIDKRIESAVCQMQSVIELGRVIRDRRTLPVKYPLKEVVVI
HQDPEALRDITSLQKYILEELNVRQLTLSTDKDKYGISLRAEPDHMVLGKRLKGAFKSIT
ASIKELKSEQLETFQKTGSIVVDGQELHEEDLRLMYSFNQTSGSATQYEAHSDSQVLVLL
DVTPDQSMLDEGVAREVINRIQKLRKKGHLVPSDEITVYYSCEPAGDYLDSVIQAHTDFI
LATTKAPLKTYPVPKDSGVIVQEKTQLKGSDLDLTIVKGAAAPRAPLTGPACAYINLQLK
LNNEEQEGVVLLENPKGDICLDMVKLRQVCSSLFGLNNTELCVFNGKTELTGKCDLLSLN
GKTLSVTSGSNPSDSSPNSDSLVCPYVNLQLANCQPAECQSGDVGTLLLVNPVGHNHLTH
NALLSETAKLFGLRSRRLKLYLDDALTQEIPAEWSMKTLDRKTLYVGVLPTTAEA
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcctgttcctgaatccatccacttcccttctgaggagaagaggatcctgcag
ctgtggaaggacaaggactgcttccaggagtgtctcaaacagtccaagaacaggcccaag
tacacgttctatgacgggcctccgttcgccacaggtctcccccactacggtcacatcctg
gcagggaccatcaaagacattgtgactcgcttcgcccaccagagcggcttccacgtggac
cgccggttcggctgggactgtcacggcctgcctgtggagtatgagattgataagaccctg
gacatcaagggaccggacgatgtggccaagatggggattgccgagtacaaccggcaatgc
aggatgatcgtcatgagatacgctaacgaatgggagaactctgtaaccaggatgggacgg
tggattgactttaagaacgactacaagactctgtacccctggttcatggagactgtctgg
tgggtgttcaggcagctgtatgataaaggtctggtgtaccgcggggtgaaggtcatgcct
ttctctaccgcctgtaacacgccgctgtccaacttcgagtcgaaccagaactacaaggat
gtgcaggatccgtcggtgatagtgaacttcccccttctggaagatgagaacgtgtgtctg
atcgcctggacaaccacaccctggactctgcctagcaacctggctctctgcgtcaactca
gagttgcagtatgtcaaggtcaaagacaacagcactgggaaggtatacattatgatggag
gccaggctggtagcactcttcaagaccgaggaggaatacaccatcatggacaagttccct
gggaagacgctgaaggggaagaaatacaagccgctgtttgactatttcaggaagtgcggg
gagacgggggccttccaggtggtgatggacagttatgtcagagaggaggaggggacagga
gtcgtccaccaggcgccatactttggagctgatgattaccgtgtgtgtatggagaacaac
atctgccagagagaccaggctcccgtctgtcctgtcgactcctctgggtgcttcactgat
gaagtcactgactttgtgggacagtatgtcaaggatgctgacaagaacatcatcaaatgg
ctgaaggaacggggtcgtctggtcaacagcggctctttcaagcatagctaccctttctgt
tggagatctgacactcctctgatctacaaggctgttcccagctggtttattcgggtcgaa
cacatggtggagaagctgctggcaaacaatgacaaatgctactgggttcctgagtttgga
tggaggagcgtcgggagtgagtcctacagcaggattgatacacgctcctctggctcagcg
gctccagagacgtgctcagaccaactactgtctgtcatacataccacccccaccacagag
cccaccaccacagagcccaccaccaccaccacagagcccaccaccaccaccacagagccc
accctcaccacagagcccaccctcaccacagagcccaccaccacagagcccacccccacc
acagagcccaccaccactaccacagaagacccacccccaccacagagaccaccaccaccc
accaccagacccaccacagagcccacccccaccacagagcccaccaccaccccaccacca
caggcccaccaccaccacagagaccaccaccagagcccaccgccaccacaggcccaccac
cacaggcccaccacagagcccaccaccaccacaggaccaccacagagcccaccaccacca
ggaaccccctgtttaatgtctctccctctctcctcactctctcctcactctctctgcccc
tctctctctctctccctctctcctcactctctcctcgctctctcgctctctctctcctcg
ctctctctctctgcctctctctctctgccttctctcgctccctcctctccctctttccct
ctttccctgcctctatccttccatagcattgaccagttaactatcccgtcccgctgtggt
aaaggcgtgttgcgcagggtcactgaggtgtttgactgctggtttgagtcgggcagcatg
ccctacgcccaggcccactacccctttgagaacaggaaggagttcgaagacaccttcccc
gctgacttcattgctgagggcatcgaccagaccagaggatggttctacaccctcctggtg
ttgtccactgctctgttcggaaaaccaccgtttaagaacgtcatcgtcaacggactggtg
ctggccagtgatggacagaagatgagtaaacgcaagaagaactaccctgatccaggtctg
gttgtggagaactatggagccgatgccctgaggctctacctaatcaactccccggtagtg
agagctgagaacctgcgtttcaaagaggaaggagtcagagatgttctgaaggatgtgttc
ctcccctggtacaacgcataccgcttcctggtccagaacgtccagcgtctccacaaggag
gacggcatcagcttcctgtacaatgaggccacagccaagcgcagtgacaacatcatggac
aaatggatccagtccttcacccagtctctcatccagttcttcaaagctgagatggatgct
tacaggctgtacacagtggtgccaaagcttgtcaagtttgtggacatgctgaccaactgg
tacgtgaggaccaaccgtaggcgtttcaagggagagagtggaacagaggactgtctgggg
gctctggagaatctcttcagtgttctgttctccatgtgcagactgatggctcccttcacc
ccatttattacagagatgatgtaccagaacctgcgtcacctgatcgaccccacctctgta
gaggagaaggactccagtagcatccactacctcatgttgcctctagtcagggagtcgttg
attgacaagcgtatagaaagtgcggtgtgtcagatgcagtctgtcattgagcttggacga
gtcatcagagaccgcaggactctgcccgttaagtatcccttaaaggaggtggtagtgatc
caccaagatccagaagctctgagagacatcacctccctgcagaaatacatcctggaggag
ttgaatgtccgccagttgaccttgtccacggacaaagacaagtacggcatcagcctgcgg
gctgaaccggaccacatggtgctgggaaagaggctgaaaggagccttcaaatccattacg
gcgtccattaaagaactgaagagcgaacagctggagaccttccagaagactggctccatc
gtggtggacggtcaggagcttcatgaggaagacctgaggttgatgtacagcttcaaccag
acctcagggtcagcgacgcagtacgaggcccattctgactcacaggtgctggtgctgtta
gacgtcactccagaccagtccatgctggatgagggtgtggctcgtgaggtcatcaaccgc
atccagaaactacgcaaaaagggtcacctggtgccgtctgatgagatcacagtgtactac
agctgtgagccggcaggagattacctggacagtgtgatccaggcccacacagacttcatc
cttgcaaccaccaaggcaccactcaagacctaccccgtccccaaggactccggcgtcatc
gtgcaggagaaaacacagttgaagggttcggacctggacctgaccatagtgaagggagca
gccgcccctcgagctcctctgactggaccagcctgtgcctacatcaacctccaactcaaa
ctcaacaacgaggaacaagagggtgtggttctcctggagaaccctaaaggagatatctgt
ctggacatggtcaagctgagacaggtctgctccagtctctttggtctcaacaacactgag
ctctgtgttttcaacggcaagactgagttgactggtaagtgtgatctgctgtctctgaat
gggaaaaccctgtcggtgacatcaggctccaatcccagtgactcctctcccaactctgac
tcactggtgtgtccctacgtcaacctccaactggccaactgtcagcctgctgagtgtcag
agtggagatgtggggaccctgctgctggtcaatcctgtcggacacaaccacctgacccac
aatgctttgctgtctgagacggctaagttgttcggcctccgcagccgtaggctgaagctc
tacctggacgatgcgctcacccaagaaatcccagcagagtggtcaatgaagacgctggac
aggaagactctgtacgttggagttctgcccaccactgcagaggcatag
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integrated database retrieval system
