KEGG   Oncorhynchus keta (chum salmon): 118378789
Entry
118378789         CDS       T09424                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04010  MAPK signaling pathway
oke04060  Cytokine-cytokine receptor interaction
oke04150  mTOR signaling pathway
oke04210  Apoptosis
oke04217  Necroptosis
oke04350  TGF-beta signaling pathway
oke04620  Toll-like receptor signaling pathway
oke04621  NOD-like receptor signaling pathway
oke04622  RIG-I-like receptor signaling pathway
oke04625  C-type lectin receptor signaling pathway
oke04920  Adipocytokine signaling pathway
oke05132  Salmonella infection
oke05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    118378789
   04350 TGF-beta signaling pathway
    118378789
   04150 mTOR signaling pathway
    118378789
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    118378789
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    118378789
   04217 Necroptosis
    118378789
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    118378789
   04621 NOD-like receptor signaling pathway
    118378789
   04622 RIG-I-like receptor signaling pathway
    118378789
   04625 C-type lectin receptor signaling pathway
    118378789
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    118378789
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118378789
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118378789
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:oke04052]
    118378789
   00536 Glycosaminoglycan binding proteins [BR:oke00536]
    118378789
Cytokines and neuropeptides [BR:oke04052]
 Cytokines
  Tumor necrosis fators
   118378789
Glycosaminoglycan binding proteins [BR:oke00536]
 Heparan sulfate / Heparin
  Cytokines
   118378789
SSDB
Motif
Pfam: TNF Ig_NUP210_13th
Other DBs
NCBI-GeneID: 118378789
NCBI-ProteinID: XP_052328790
LinkDB
Position
20:complement(38244835..38249509)
AA seq 242 aa
MAGDCSRVMLDVESGPVYPATTVTLVREKCTHRWRLCGALLAVALCVSLFVTWHTKRQDQ
VEDVNELQHTLRQLSVNRKAAIHLEGEYNGSGKYKTTVEWTDDEGQGISQGGLKLNNNEI
VIPRPGLYFVYSQVSFRVSCKADPKHPNNQEMVHLSNTVTRWSPSYGTEDNKEYQMLLNS
VRTVCKKSSNSEASEGQWYNAVYMGAVFSLEKGDRLRTVTENRLLPHLESGDGKNFFGVF
AL
NT seq 729 nt   +upstreamnt  +downstreamnt
atggcaggtgattgcagcagagtgatgttagacgtagagagtggtcctgtgtacccggca
acgaccgtgaccctggtacgggagaagtgcacacaccggtggaggctgtgtggtgccctg
ctggccgtggcactgtgtgtctcacttttcgttacctggcacaccaagagacaagatcag
gtcgaggacgttaatgaacttcagcatacactgagacaactctctgtaaacagaaaggct
gccattcatctggaaggtgagtacaacggtagtggaaaatacaagaccacagtggagtgg
acagacgatgagggccagggaatctcacaggggggtcttaaactcaacaacaacgagatc
gtgatcccccggccgggcctatacttcgtctacagccaggtctctttccgcgtcagctgc
aaggccgaccccaagcaccctaacaaccaggagatggttcacctgagtaacacggtcacg
cgctggtccccaagctacggcaccgaagacaacaaggagtaccagatgctgctcaactcc
gtacgcaccgtgtgtaagaagtcttccaacagcgaggccagcgaaggacagtggtataat
gccgtgtacatgggagccgtgttcagcctggagaagggagacaggctgcggacagtcaca
gagaacaggcttctgccccatctggagagtggcgatgggaagaacttctttggcgtgttc
gccttgtga

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