Oncorhynchus keta (chum salmon): 118379005
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Entry
118379005 CDS
T09424
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04137
Mitophagy - animal
oke04141
Protein processing in endoplasmic reticulum
oke04210
Apoptosis
oke04217
Necroptosis
oke04621
NOD-like receptor signaling pathway
oke04622
RIG-I-like receptor signaling pathway
oke04920
Adipocytokine signaling pathway
oke05132
Salmonella infection
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118379005
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118379005
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118379005
09143 Cell growth and death
04210 Apoptosis
118379005
04217 Necroptosis
118379005
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118379005
04622 RIG-I-like receptor signaling pathway
118379005
09152 Endocrine system
04920 Adipocytokine signaling pathway
118379005
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118379005
09171 Infectious disease: bacterial
05132 Salmonella infection
118379005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118379005
04121 Ubiquitin system [BR:
oke04121
]
118379005
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118379005
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118379005
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
118379005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
zf-C3HC4_2
TRAF3_RING
zf-C3HC4_4
Sina_ZnF
SlyX
zf-RING_5
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
118379005
NCBI-ProteinID:
XP_052381557
EnsemblRapid:
ENSOKEG00005000661
LinkDB
All DBs
Position
9:26710185..26747008
Genome browser
AA seq
619 aa
AA seq
DB search
MATEEPSPPSSMESNKPGFPKQILANKLEDKHLCNCCQKLLRRPFQAQCGHRFCSYCFNR
TVRDGPQKCSACIKEDIFEEPTSILKQGCAFPDNAARREVENLSVVCINEGCTWKGNIKE
YELSHEGKCDYMIIPCPSCKEQIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKERIHDHERACT
YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLLELHHSLRELEARVSQLSTTSTGPPVQ
GATNSSSSPCLSGPPALALPLPPPPALAPTLTVSTSFTPLPSSVGAALELQLHSEKTKVA
ELGRRCTDLEVKAGMFENVVCVLNREVERFATTMEASNRQHRLDQDKIEALSNKVRQLER
TVGLKDLTVAEMEGRLREISGTTFDGVFIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKY
GYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKMVCLCLPASGSGWSERS
HSHFALQVTLMLLDQSNREHIIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKN
SYIRDDTIFIKAIVDLTGL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaagaaccatcccctccgtcgtccatggagagcaacaaacccggcttcccc
aaacagatcctggccaacaagctggaagataaacacctgtgtaactgctgtcagaagctg
ctgcggaggcccttccaagcccagtgtggacaccgcttctgttcctactgcttcaatagg
actgtcagagatggacctcagaaatgcagtgcttgtatcaaagaggacatttttgaagag
cccacgtcgattctaaaacaaggctgtgcttttcctgacaacgcagctcgacgagaggtc
gaaaacctctctgttgtctgcatcaacgaaggctgtacatggaaaggcaatattaaagaa
tatgagttgagccacgaggggaagtgtgactacatgatcatcccctgcccctcctgtaaa
gagcagatccgcttcaacgaacaggaacgccacaacgagcgagagtgccctgagagaact
ctcaactgcaagtactgcaaggaaccatttcatttcaaaaacatcaaggcccacgacgag
atctgccccaagtaccccatgatctgtgaaggctgtgccaagaagaaaatacccagggag
aagtacgtggaccacattaagttctgcagcaaattcagaacgccatgcagattccatgtt
gttgggtgtgatatgtcagtggagaaggagaggatccatgaccacgagagggcctgcacc
tatgagcacctcaacttgctgctgcactacattatggggatgaaggtgagcatggagggc
ctgcagccgcaaggcctggagctggctggacacaagctcctggagctccaccattccctc
agggagctggaggcacgcgtctcccagctcagcactacatccaccgggcctcccgtgcag
ggggccaccaactcttcttcctccccgtgcctctccgggcctcccgccctagctcttccc
ctgcctccacctcccgccctggcccccaccctgactgtgtccacctccttcacccccttg
cccagctcggtgggggcggccctggagctacagctccacagtgagaagaccaaggtggcg
gagctgggacgcaggtgcaccgacctggaggtgaaggcggggatgtttgagaatgtggtt
tgcgtgttgaaccgagaggtggagcgctttgccacaaccatggaggccagtaacagacag
catcgcctagaccaggataagattgaggccctgagcaacaaggtgcggcagctggagagg
acggtggggctgaaagacctgacggtagcagagatggaaggcaggctgagggagatatcg
ggcaccacattcgacggcgtcttcatctggaggatttctgactttaccaaaaaaagacag
gatgccatcgctggccgagctcctgccatgttctcaccagccttctacaccagtaaatac
ggctacaagatgtgtctgcggatctacctgaacggggacgggacagggcgtggcagccac
ctgtctctgttctttgtggtgatgaggggactgagtgatgctctgctcaaatggcccttc
aaccagaagatggtctgcctttgtctccctgcttccggttccggttggagcgagcggtcg
cattcgcacttcgctctgcaggtgactctgatgctgctggaccagagtaacagggagcac
atcatcgatgccttccggcccgacgtcacttcctcctccttccagaggcctgtaagtgag
atgaacatcgccagcggctgcccgctcttctgcccgctctccaagctcgacgccaagaac
tcctacatccgcgacgacaccattttcattaaggccatcgtggatctcacaggcctctag
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