KEGG   Oncorhynchus keta (chum salmon): 118379271
Entry
118379271         CDS       T09424                                 
Name
(RefSeq) sequestosome-1-like isoform X1
  KO
K14381  sequestosome 1
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04137  Mitophagy - animal
oke04140  Autophagy - animal
oke04217  Necroptosis
oke04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:oke00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118379271
   04137 Mitophagy - animal
    118379271
  09143 Cell growth and death
   04217 Necroptosis
    118379271
   04218 Cellular senescence
    118379271
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118379271
   03029 Mitochondrial biogenesis [BR:oke03029]
    118379271
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118379271
Membrane trafficking [BR:oke04131]
 Autophagy
  Mitophagy
   Cargo receptors
    118379271
  Pexophagy
    118379271
  Aggrephagy
    118379271
  Xenophagy
    118379271
  ER-phagy
   ER-phagy recepters
    118379271
  Other autophagy associated proteins
   Midbophagy
    118379271
Mitochondrial biogenesis [BR:oke03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    118379271
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118379271
SSDB
Motif
Pfam: UBA_5 ZZ PB1 CamS
Other DBs
NCBI-GeneID: 118379271
NCBI-ProteinID: XP_035622173
LinkDB
Position
4:57378272..57383457
AA seq 464 aa
MSMTVKAYLLGKEDAPKEIRRIAVDQDVSTSFEYLKKKVEDVFSTLRNVTYQMFYKDEDG
DMIAFSTDDELIMGLTCIKDYTFRLFIKEKKEHRREFPAFAFPGGVPPFAYPPPPGTPHM
GHPPPHGSHGHHGHGHHGHGPPMVHPNVTCDECEGSVAGTRFKCTVCPDYDLCSTCQAKG
LHKEHVLLPIWHPFNNAFEWFPRGKWMRKMRHCTWAQAQNQAQPGPSGSQPGQAAPGDRQ
PSDASSAASQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDVELEAKRTKVMTPNPSPPGS
GGPPSARSNNGTGVSEGDGTKEGDMVVDGLSSLGSASDLATGGKDPGGSGDDEWTHLTSK
EVDPSTGELQSLRVGEEGSLEAPGSPTVPQGPSQEPQKSLTLAEAAAYPHLPQDADPRLV
ESLSQMLAMGFTDEGGWLTRLLHTKDCDVGAALDTIHYAKPAKK
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgtctatgaccgtcaaagcctatctccttgggaaggaggatgcgccgaaagaaattcgt
cgcattgctgtggaccaagatgtttcaacgagttttgagtatctgaaaaaaaaggttgag
gatgttttctcaaccctgcgaaatgtcacctatcaaatgttttacaaagatgaagatggt
gacatgatcgccttctccactgatgatgagctcatcatgggcctcacctgcatcaaggac
tacacattccgcctcttcatcaaggagaagaaggagcataggcgtgaattccctgctttt
gccttccctgggggtgtcccccctttcgcctatccccctccccctggaacacctcatatg
ggacatcccccacctcacggttcccacggccaccatggtcatggccaccatggtcatggg
ccccccatggtgcaccccaatgtgacctgtgacgaatgtgagggctctgtggcggggacc
cgcttcaagtgcacagtgtgccctgactatgacctgtgctccacatgccaagccaagggg
ctacacaaggagcacgtcctcctgcccatctggcaccccttcaacaacgcatttgagtgg
ttccctcgtgggaagtggatgaggaagatgaggcactgcacgtgggctcaggcccaaaac
caggcccagcctggtccctctgggtcccagccaggccaggcagccccaggggacagacag
ccctctgatgcctcatctgctgcctcccagcagtcccaagccaatatggattacctgaag
aacattggagaaggggtggcagccatgcttagcccactgggtatcgatgtggatattgat
gtggagctggaggcaaagaggaccaaggtgatgacccccaatccgtccccacctgggtca
ggaggcccccccagtgctaggagcaacaacgggacaggggtgtccgagggagatgggact
aaagagggggacatggtggtggacgggcttagcagcctagggagcgcgagtgatttagct
acgggtggtaaagacccagggggcagtggtgacgatgagtggacccacctgacctccaag
gaggtggatccctctacaggtgagctccagtctctcagggtaggcgaggagggctctctg
gaagccccggggtcccctactgtcccccagggtccctcacaggaaccacagaagtccctc
actctcgctgaggccgcagcctacccccaccttcctcaagatgccgacccacgcttggtg
gagtccctgtcccagatgctggccatgggcttcacagatgagggtggctggctcacccgc
ctcctccacactaaggactgtgatgtcggggccgccctggacaccatccactacgccaaa
cccgccaagaagtaa

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