Oncorhynchus keta (chum salmon): 118379866
Help
Entry
118379866 CDS
T09424
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118379866
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118379866
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118379866
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118379866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
118379866
NCBI-ProteinID:
XP_052316686
LinkDB
All DBs
Position
13:complement(3866403..3954826)
Genome browser
AA seq
1058 aa
AA seq
DB search
MAQLYYKKVSYSPYQDRIPLQIVRAEVDLSAEERAYLTAVEKGDYVGVKHALREVEVYYN
MDVNCLDPLGRSALLIAIENENLEVMELLLDHGVATGDALLYAIRKEVVGAVEVLLSHRR
PGGEKQVPSLMTDSQFSEFTPDITPVILAAHTNNYEIIKLLVQRKVTIPRPHQIRCDCVE
CASSSEVDSLRHSRSRLNIYKALASPSLISLSSEDPILTAFRLGWELKELSKVENEFRQE
YEELSQQCKLFAKDLLDQARSSGELETILNHRDDSEELDSRETSHDLAKLKLAIKYQHKE
FVAQPNCQQLLATLWYDGFPGWRRRHWVVKLGTCFIIGLLFPVFSMIYLLAPKSALGVFV
KKPFIKFICHTASYLNFLFLLLLASQHIARTNLHMQGPPPTVVEWMILPWVLGFIWAEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYTQYNSSRPREEWEMWHPTLIAEA
LFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETKASDEPNNCKGIRCEKQNNAFSTYFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIVPSPKSVWFLCLWVHHRLCRRGAPPADDTDKHHDLRKFPEHHADSLIQNQHYQEVIR
SLVKRYVAAMIRSSKTDEGLTEENFKELKQNISSFRYEALDLLGNRQPRRRHYSSSSNAT
LRDEGGTSDEGGPDSNFDPNDPSLGSQEVGGAKRSMGMTFLTPTGSMENKKPKYGVSALV
RSISGMEVVSVTKMEGEGWGEEEEEEGKPKSNGVRREAVSSSSSIFPSFPSSLSFARIQR
LSMAASNKTPDYFKRLGFLFSRKAPLLPLSVSQSPLSVTISDGLLHPLRGRGSYDLSLVS
ETQLNQAGHTKPVGATPNSSRRANETDSLLPLPLPPPCPCQSLHCASNMADSKFHHLDSS
ESVFEGGGGGRVVGRGSVEPLAVVEESCGTEDSVTTQL
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttgtattataagaaagtgagctactctccgtaccaagacagaatccctctg
cagattgtacgggctgaggtggatctctctgctgaggagagggcctacctcactgccgtt
gagaaaggggactatgttggcgtgaagcatgcgttgcgtgaggtggaggtatactacaac
atggatgtgaactgtctggaccctctggggcggagcgcgctgctgatcgctatcgagaac
gagaacctggaggtgatggaactacttctggaccacggggttgctacgggagacgccttg
ctctacgccatacggaaagaggtggtgggggccgtggaggtgctgctgtctcataggaga
cctggtggagagaaacaggtcccatccctgatgacggacagtcagttctcagagtttact
ccagacataactccagtcatcctggcagctcacaccaacaactatgagatcattaaacta
ctggtccagagaaaagtcacaattcccagaccccaccagatacgatgtgactgtgtcgag
tgcgcctccagctcagaggtggacagcctacgtcactccaggtctcgtctgaacatctat
aaggcgctggcctctccctcgctcatctctctctccagtgaagaccccatcctcacggcc
tttagactgggctgggaactcaaagaactcagcaaggtggagaatgagtttcgtcaggag
tatgaggagctgtctcagcagtgtaagctgtttgctaaagacctgttggaccaggcgagg
agcagtggagagctggagactatactgaaccacagagatgacagtgaagaactggactcc
agagagaccagccacgacctggccaaactcaaactggccatcaaataccaacacaaagag
tttgtagcccagcctaactgccaacaactcctagctactctgtggtacgatgggtttcct
ggctggaggaggcgacactgggttgtcaaattggggacctgtttcatcataggactgctg
ttccctgtcttctcaatgatctatctcctagcccctaagtctgccttaggtgtgtttgtg
aagaaacccttcatcaagttcatctgtcacacagcatcgtacctgaacttcctcttcctc
ctcctcctcgcctcacaacacatcgccaggactaacctacatatgcagggccctcctcct
actgtggttgaatggatgatactaccctgggtactaggttttatctgggctgagattaag
gagatgtgggatggaggttttacagagtatatacacgactggtggaacctgatggatttt
gctatgaactccctctacctggctactatatcactgaagatagtggcttacacacagtac
aactcttcccgtcctagagaagagtgggagatgtggcaccctaccctgatagcagaagca
ttgtttgctatagctaatatcttcagttctctacgactcatctccctgttcacagccaac
tcccacctgggacctctacagatctcactgggacggatgctgctggacatactcaagttc
ctctttatatattgtctggtgttgcttgcgtttgccaacggtctgaatcagctgtacttc
tactacgagaccaaggcctcagacgaacccaacaactgcaagggcatccgctgtgagaaa
cagaataacgctttctcaacgtactttgagactctccagtctctgttctggtccgtcttt
ggcctgttaaacctgtacgtgactaacgttaaagctcgtcatgagttcactgagtttgtg
ggggccaccatgttcggaacctacaacgtcatctctctggtggttctgctcaacatgttg
atcgccatgatgaacaactcctaccaactcatcgctgaccatgcagatatagagtggaag
tttgcccggaccaagttatggatgagttattttgacgaggggggtactctgccccctccc
ttcaacatcgtccccagtcctaagtcagtgtggttcctctgtctgtgggttcaccatcgc
ctctgtaggagaggagcgccccctgctgacgacacagacaaacaccacgacctacgaaag
ttcccggagcatcatgcagacagcctgatacagaaccagcattatcaggaagtgatccgt
agcctggtgaagaggtacgtggcggccatgatacgcagttccaagacggacgagggactg
accgaggagaactttaaggagttgaagcagaacatctccagtttccgttatgaggcttta
gatctccttggtaaccgtcagcctcgcagacgccactactcatccagcagcaacgccaca
ctgagagacgagggaggaaccagtgatgagggggggcccgactctaactttgaccccaat
gatccttctctggggtcgcaggaggtgggaggagccaagaggtcaatgggcatgaccttt
ctgaccccgacaggaagcatggagaataagaaacctaaatatggcgtctccgctttggtc
cgcagtatttcaggaatggaggtggtttctgtaacgaagatggagggagaaggatggggg
gaggaggaagaggaagagggtaaaccaaagagcaacggggtgaggagagaagccgtctct
tcctcttcttctatcttcccttcgttcccttcctccttatccttcgctcgcatccagcgg
ttgtcgatggcggcatccaataagacgccagactattttaaacgcctcggcttcctgttc
tcacgcaaagccccgctccttcccctctccgtcagccaatcccctctctccgtcaccatc
tcagacggcttgctccaccccctgagaggtcgagggtcgtatgacctcagtttagttagc
gagacgcagcttaaccaggcaggacatactaagccagtcggagccactcctaattcctcc
agacgagcaaatgagactgactctctcctccccttgcccctcccacctccctgcccctgc
caatccctgcactgtgcttccaatatggcagactctaaattccaccatctggactccagc
gagagcgtcttcgagggaggaggaggtggcagggttgttggacgggggtcggtggagccg
ttggctgtcgtcgaggaatcctgcggcacggaggactctgttactacgcagctgtaa
DBGET
integrated database retrieval system
