Oncorhynchus keta (chum salmon): 118379925
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Entry
118379925 CDS
T09424
Name
(RefSeq) short transient receptor potential channel 6-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118379925
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118379925
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank_4
Ank
Cmr1_C
CrgA
Motif
Other DBs
NCBI-GeneID:
118379925
NCBI-ProteinID:
XP_052385127
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All DBs
Position
11:3594381..3680470
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AA seq
907 aa
AA seq
DB search
MNQRRSVSEQNHVIERRARSRDNLLINADFGDDNCSSYHGYYPGRSSAERQLLARQAVTK
RRQALRGPAYMFSDPPISLSDAEQRFLEAAEYGNIPEVRRMVLHMPSLNVNAVDYMGQNA
LQLAVANEHLEVTELLLGRVELSRVGDALLLAISKGYVRITEVLLGHRSFSDAQRLTASP
AQVDILDDFYAYDEDGTRFSHDVTPVILAAHCHEYEIVHNLLVKGARIDPPHDYFCCCDS
CNYQQQFDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELAVLANIEKEFKND
YRRLSGQCKDYVVGLLDLCRSTEEVEAILSGDTDSEEKYHPPGRPSLMRLKLAIKYELKK
FVAHPNCQQQLLSIWYENLPGLRQQTTAVKLLVVLGVAVGLPGLAVAYLVAPCSRVGKVM
RSPFMKFVAHASSFSIFLCLLVLNAADRFAGTTLLPNMTTHLPTRPQQNQQQEEDSTMLY
RMTTTPFTWMEILIISWVIGMIWAEVKEIWSQGAGEYLLEPWNFLDFGMLAIFLASFSSR
FSAYNHTHSAQLYVHTHYTHLSTLDNITLPPHVHYYTLARLSWLPSDPQLISEGLYAVAV
VLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLYSYYLGAK
QNDAFTTLEESFKTLFWAIFGLSEVKSVVINNDHKFIENIGYVLYGVYNVTMVIVLLNML
IAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKAMLGLATAVREL
LLHSHTQPPDGAQLNQLGDSKASGYSNSPRPTRYQKIMKRLIKRYIIKAQTDKENDEINE
GELKEIKQDISSLRYELLEDKNHNMEELQELLGRLRETYTTHHTEEHTQLHTHHTEEHTH
HTEEHTQ
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcgccggtctgtgtcggaacagaaccatgtgatcgagcggagggccaggagt
cgtgacaacctgctcatcaatgcagactttggagatgacaactgttccagttaccatgga
tactacccaggtcgcagcagtgcagagcgacagctcctggcacgtcaggcggttactaag
cgacgacaggccctgcgaggccccgcctacatgttctcggatccgcccatcagcctctcg
gatgcagaacagcgcttcctggaggcggcagagtatggcaatatcccagaggtgcgacgc
atggtcctacacatgcccagtctcaacgtgaacgcagtagactacatgggccagaatgca
ttgcagctggcagtggccaatgagcatctagaggtgactgagctgctgcttgggagagtg
gagctatccagggtgggagacgctctgctactggccatcagtaaaggttatgtgcgtata
acggaggtgttgctaggccaccgttcgttcagtgacgcgcagcgcctgacagcaagccct
gcccaggtggacatattggatgacttctacgcttatgatgaggatgggacacgtttctcc
catgatgtgactccagtgattcttgctgctcattgtcatgaatatgagattgtccacaac
ctattggttaaaggagctcgtatagacccgccccacgactacttttgttgctgtgattcg
tgcaactaccagcagcaatttgactccttcagccactcacggtccaggattaacgcttac
cgtggcctggctagccccgcctacctctcgctgtccaatgaggatccagtattagccgcc
ctggagctcagtaacgagttagctgtcctggccaacatcgagaaggagtttaagaatgac
taccggcgtctgtctgggcagtgtaaagactatgtggtaggtctgttggatctctgtcgc
agcactgaggaggtggaggctatactgagtggagatactgactcagaggagaagtaccat
ccacctggtcgaccctcactcatgcgactcaaactggccatcaaatatgaactcaagaag
tttgtagcccatcctaactgtcaacagcagttgttgtctatctggtatgagaacctacca
ggtctgagacagcagactacagctgttaaactactagtggtcctgggagtggctgttgga
ctacctggactagctgtggcttacctggtggccccctgcagtagggtagggaaggtgatg
agaagtcccttcatgaagttcgtggcccacgcttcctctttctccatctttctgtgtctg
ctggtcttgaacgctgccgaccgcttcgctgggaccacactgctacccaacatgaccaca
catctccccacacgaccgcaacagaaccaacaacaagaggaagactccaccatgctgtac
cgtatgaccaccacccccttcacctggatggagattctcatcatatcctgggtcattggt
atgatttgggcagaggtaaaggagatctggtcccagggagcgggagaatacctcttagaa
ccatggaacttcctggacttcggaatgttggccatcttcctggcgtccttcagttcccgc
ttctctgcctataaccacacccactcagcccagctatacgtccacacacactacacccac
ctctctaccctggacaacatcacccttccaccacacgtacactactacacactggctcgt
ctctcctggttgccctctgacccccagctgatatctgagggcctgtatgcggttgccgtg
gtgctcagtttcagccgcatcgcctacatcctgccagccaatgaaagcttcggaccgctg
cagatatcactgggacgcactgttaaagacatcttcaagttcatggtgatctttatcctg
gtgttcctggcgtttatgatcggaatgttcaacctctactcctactacctgggggccaag
cagaacgatgcctttaccactctcgaggagagctttaagactctgttttgggcgatcttc
ggcctgtcggaggtgaagtcggtcgtcattaacaacgatcacaagttcattgagaacatc
ggctacgtgctgtatggtgtttacaatgttaccatggtgatcgttctgctcaacatgctg
atcgcgatgataaacagctctttccaggaaatagaggatgatgctgatgtggagtggaag
tttgcccgtgccaagctgtggttctcctactttgaggaaggcaggaccctgcccgtccca
tttaacctggttcctagtcctaaagcaatgctgggcctggccactgctgttagagagctg
ctgctacacagccacacacagccacctgacggggcgcagctcaaccagctgggagacagt
aaagcttcaggatacagcaactctccgagacccaccagataccagaagatcatgaagcgc
cttataaaacgttacatcatcaaagcccagacggacaaagaaaatgacgagatcaacgaa
ggtgagctgaaagagattaagcaggatatctccagtctgcgttatgagctgctggaggac
aagaatcacaacatggaggagctgcaggagcttctggggaggctgagagagacttacacc
acacaccacacagaggaacacacacaattacacacacaccacacagaggaacacacacac
cacacagaggaacacacacaataa
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