Oncorhynchus keta (chum salmon): 118382370
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Entry
118382370 CDS
T09424
Name
(RefSeq) exostosin-1a-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
oke01100
Metabolic pathways
Module
oke_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
118382370
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118382370
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
118382370
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
118382370
Glycosyltransferases [BR:
oke01003
]
Glycan extension
O-Glycan
118382370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
118382370
NCBI-ProteinID:
XP_052371420
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MLHNSTFCLVPRGRRLGSFRFLEALQAACVPVILSNGWEMPFSEIIHWNTAAVIGDERLL
LQIPSTVRSIHQDNILSLRQQTQFLWEAYFSSVERIVLTTLEIIHDRVLQHAARSNLMWN
SLPGGLYSLPQYSSYLGDFPFHYAKLGIKPRPKFTAIIHAVTPLVSQSQPILKLLVAVAK
SQHCVQVIVLWNCDKPLPAKHRWPATAVPVLVIDGESKVMSSRFLPYDTIPTDAVLSLDE
DTVLSTTEVDFAFTVWQSFPERIVGYPARSHFWDSNKERWGYTSKWTNDYSMVLTGAAIY
HRYYHYLYTSYLPASLRDLVDQLSNCEDILMNFLVSAVTKLPPIKVTQKKQYKETMMVQT
SRASRWADPDHFAQRQSCMNKFASWFGSMPLVHSNMRLDPVLFKDQVSILRKKYKDIERL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacaactccaccttctgtctggttcccagaggacgacgcctgggatccttccgc
tttctggaagcactgcaggctgcctgtgtacctgtgatactcagtaacggctgggagatg
cccttctcggagatcatccactggaacacagcagctgtgatcggggacgaacgactgcta
cttcagattccgtctacggtgcgttccattcaccaggacaacatcttgtctctcagacag
cagacccagttcctgtgggaggcctacttctcttctgtagagaggatagtactcacaaca
ctggagatcatccatgaccgggtgctccagcatgcagcccgtagtaacctgatgtggaac
agtcttcccggaggtctctactccctgcctcagtactcctcatacctgggagacttccct
ttccactatgctaagctaggtatcaagcctcgtcccaagttcacggcgatcatccatgct
gtgactcccctggtctcccagtctcagcccatcctcaagctactggtggctgtcgccaag
tcccagcactgtgtccaggtgatcgtcctatggaactgtgacaagcccctcccggccaaa
catcgctggcctgccacagcagtacctgtcctggtcatagatggagagagcaaggtgatg
agcagtcgtttcctgccctatgacacaataccaacagacgccgttctgagtctggacgag
gatacggttctctctactacggaggtggactttgctttcacggtgtggcagagtttccca
gagaggattgtgggatacccggccaggagtcatttctgggacagcaacaaggagaggtgg
ggttacacctccaagtggaccaacgactactctatggtcctgacaggagctgctatatac
cacagatattaccactacctgtataccagttacctgccggctagtctgagggacctggtg
gatcagctgtctaactgtgaagacatcctgatgaacttcctggtgtcagccgtcaccaag
ctgccgcccatcaaggtcacccagaagaaacagtacaaggagactatgatggtgcagacc
tccagagcgtcccggtgggccgacccagaccactttgcccagcgacagagctgcatgaat
aagtttgccagctggtttggcagcatgcccctggtgcactctaatatgcgtctggacccg
gtgttgtttaaagaccaggtgtccatactgagaaagaaatacaaggacatagagagacta
taa
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integrated database retrieval system
