Oncorhynchus keta (chum salmon): 118384258
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Entry
118384258 CDS
T09424
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118384258
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118384258
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
118384258
NCBI-ProteinID:
XP_052374341
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All DBs
Position
5:2031412..2101825
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AA seq
1258 aa
AA seq
DB search
MKDTDKRHEGGGRRTGTEKSEKDQSWIPKIIKKRVCTTFVEDSLSNGVLCQCGGVRETHC
SIATGDFFGAAIVSQWDSSQHSSEYPTDAFGELEFAGAGRRHSHFLRLSCDTPPHIMYSL
MTAHWGVPSPNLVVSVVGGREKVKPWVREVLRQGLVRAAQSTGAWIVTGGLREGVGRCVG
EAVRDHAAAASSLSQKKVIAVGVAPWGLVHNRQWLVNSEGSFPARYYVQNTSHDSCCLDS
NYRAFLLVDDGSVGQRGGETAFRAKMEDYISHQRTGIWGSGSIDVPVLCMLISGDAAMLE
RVDLSLKKATPWLVLNGSGPAADLICELLDALAAGPMSPPSPQPEGEGSEKTSAELRDRA
RERVRRHFPAKADLEKLVDRALSIYKNKDLITVFHGEQESSDDFDTVLLKALVRASKRVS
SDASEYTEELKLAVAWNRVDIAKSELFNGDIQWKYEDLEDSMTDALINDKPQFIRLFNEN
GLNILDYLTYRHLEVLYRSLPDSSLAFTLLQRLLTERQGLAICSPKEALALKSPQNPMSP
LSGPSSVKELSLYEVSRLLWDILGDVCEPFYYSLLGLDQSASTRRALKQVNKLLQGDCSY
REQSCLYPWASLFIWAVLQNRSEMAVYFWEMAGESVHSALAGCKILRELSKLESETETKL
SMKELAQKFENLALDVFSECYQSSESRSFTLLIRQSPVWGKATCLQMATSADARLFFSHD
GVQSLLSQIWWGDMKRSTKVWKLVLSFFLPPLIYTNLISFREHEEEVRSEEEVPLGRDTE
SLDGGDATMLSLSDIMQTEEDVQEYAALRDNLKSAPSSNPKRPFVLLRWREFWFAPVTSF
LGNVLMYFLFLILFAYILLLDFNPPPPHGPSTLEFVLYFWVFTMVCEEIRQTFFRGNTTL
YQRMKLYIEDMWNKCDITAISLFALGMCCRMFPWSYEFGRAVLAVDYMVFTLRLIHIFAI
HKQLGPKIIIVEKMMKDVFFFLFFLAVWLLAYGVANQALLYSYDPRPGWIFRRVFYRPYL
HIFGQIPIHEMDADKLEEGIECTNNATLVEAGAEPCMSTDHNWLVVILLVIFLLVTNILL
VNLLIAMFSHTFSKVQEHSDNYWKFQRYNLIVEYHSRPCLAPPFILISHLHLIIKRHIRK
IPSTKIKHFVLEIHGREASRLNTWEAIQKENILFAQNKREREKDSERLKRTSVKVDSVLK
QMAEIRDHDRRLRMLETELEYCSSALSWMTEALSQSNLVKTTRPPPALRDLTSLSPTS
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatacggataaaaggcatgaaggaggcggaaggagaacgggaacagaaaaatca
gagaaagatcagagctggatccccaagatcatcaaaaagagagtttgcaccacattcgta
gaggactcattaagcaatggggtgttgtgtcagtgtggtggtgtgcgggagacacactgc
tccatcgctacaggagacttcttcggggcggccatcgtcagccagtgggatagctctcag
cactcctcagagtaccccactgacgcctttggcgagttggagtttgcaggggccggcagg
agacacagccatttcctgcgtttgtcatgcgacaccccacctcatatcatgtacagcctg
atgacggcccattggggggtgccctcccccaacctggtggtttctgtggtgggtggtcgc
gagaaggtcaagccctgggtcagggaggtgctgagacaggggctggtcagggcggcacag
agcacaggggcgtggatagtgacgggggggctgagggagggggtgggacgttgtgttggg
gaagcagtgagggatcatgcggcggcggcctcctccctgtcccagaagaaagtcatcgct
gtgggtgtggccccctggggcctcgtgcacaacagacagtggctcgtcaactctgagggt
agttttccagcacggtattatgtccagaacacgtcccatgactcgtgctgcctggatagt
aactaccgggccttcctgctggtggatgatgggagtgtaggccagcggggaggggaaacg
gccttccgggccaagatggaggactacatatcccaccagcgcacaggcatctggggcagt
ggcagtatagatgtccctgtattgtgtatgctcatctcaggggacgctgccatgctggag
agggtggatctctctctgaagaaggctactccctggctggtgttgaatggttctggtcca
gcggcggaccttatctgtgagctgctggatgcactggcagccgggcccatgagccccccc
tctccccagccagagggtgaggggagcgagaagaccagtgcggagctgcgcgacagagcc
cgtgagagggtccggagacacttccctgccaaggcagacctggagaagcttgtggacagg
gctctgagtatctataaaaacaaagatctgatcacagtgttccacggggagcaggagagt
tctgatgattttgacacagtgctactgaaggctctcgtcagagccagtaaacgtgtgtcc
agcgatgccagtgagtacacagaggagctgaagctagcagtagcctggaacagggtggac
atcgctaagagtgaactcttcaacggagacatccaatggaagtacgaggacctggaggac
tccatgacggatgcgctgatcaacgacaagccccagttcatacgtctattcaacgagaac
ggcctcaacatcctggactacctaacctacaggcacctggaggtcctgtaccgctcgctg
cccgacagttctctggccttcactctgctccagcggcttctcacagagagacagggcctg
gccatatgctctccgaaagaggccttagccctcaagagccctcagaaccccatgagcccc
ctatcaggcccctcctctgtcaaagagctcagcttgtatgaggtgtcacggcttttatgg
gacatcctgggagatgtgtgtgagcccttctactacagtcttctcggtttggaccagagc
gccagcaccaggagagcactgaagcaagtgaataagttgttgcagggggattgttcatac
agggagcagagctgtctctatccgtgggcctctctgttcatctgggctgtgctacagaac
cgcagcgagatggccgtctacttctgggagatggcaggggagtctgtccacagtgctctg
gcaggctgtaagattctgagggagctgtctaagctggagagtgagacggagaccaagctc
tctatgaaggagctggcccagaagtttgagaacttggcccttgacgtgttcagtgagtgc
taccagagcagtgagagccgctctttcaccctccttataaggcagtctccggtgtggggc
aaagctacctgtctacagatggccacctcagccgacgcccgcctcttcttcagccacgat
ggcgtgcagtctctgctgtctcagatctggtggggagacatgaagaggagcacgaaggtc
tggaaactggtcctctccttcttcttaccccccctcatctacaccaacctcatcagcttt
agggaacatgaggaagaggtgaggtcggaggaggaggtacctcttggtcgagacacagag
agtctggacggaggagatgccactatgctctccctctccgacatcatgcaaacggaagag
gatgtccaggaatatgctgctctaagggacaatctgaaaagtgccccctcctccaatccc
aagaggcccttcgtattgctgcgctggagggagttctggtttgcgcccgtcacctcgttc
cttggcaacgtgctgatgtacttcctgttcctcatcctgtttgcttatatcctattgttg
gacttcaatcccccgccgcctcacggcccgtccaccttagagtttgttctatacttctgg
gtcttcaccatggtctgtgaggagattcggcagacattcttcaggggcaacaccacttta
tatcagagaatgaagctctacatcgaggacatgtggaataagtgtgacatcacagccatc
tcactctttgcactgggaatgtgctgcagaatgttcccgtggtcctatgagtttggccgt
gctgtgttggctgtggactacatggtgtttaccctccgtctcatccacatcttcgccatc
cacaaacaactgggacccaagataatcattgttgaaaaaatgatgaaagacgtcttcttc
ttcctgttcttcctggcggtgtggctcctggcctacggcgtagccaatcaggcgctgctc
tactcctacgacccccgtcccggttggatctttcgcagagtgttctacaggccatacctc
cacatatttggacagatccccatacacgaaatggatgctgataaactggaggaggggata
gagtgcaccaataacgccactctggtcgaggcgggggcagagccctgcatgagtaccgac
cacaattggctggtggtcatcctactggtcatcttcctgctggtcaccaacatcctcctg
gtcaacctgctcatcgccatgttcagtcacacgttctccaaagtgcaggagcacagcgac
aactactggaagttccagcgctacaatctgatcgtggagtatcactccagaccctgcctg
gcaccacccttcatcctcatctcccacctccacctcatcatcaagagacacatccgcaag
atcccctccacgaagatcaaacactttgttctggagatccatggtagggaggccagtaga
ctgaacacgtgggaggccatccagaaggagaatatactctttgcccagaacaaacgagag
agagagaaagactcagagagactcaaacgcacctccgtcaaggtggacagtgtattaaag
cagatggcagagattcgggaccacgaccgcaggctgagaatgttggagaccgagttggag
tactgttctagtgccctctcctggatgacggaggctctctctcagagtaacttggtaaag
accacacgtcctccgcccgctctcagagatctgacctctctctctccaactagctga
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integrated database retrieval system
