Oncorhynchus keta (chum salmon): 118385484
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Entry
118385484 CDS
T09424
Name
(RefSeq) TNF receptor-associated factor 2-like
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04137
Mitophagy - animal
oke04141
Protein processing in endoplasmic reticulum
oke04210
Apoptosis
oke04217
Necroptosis
oke04621
NOD-like receptor signaling pathway
oke04622
RIG-I-like receptor signaling pathway
oke04920
Adipocytokine signaling pathway
oke05132
Salmonella infection
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118385484
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118385484
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118385484
09143 Cell growth and death
04210 Apoptosis
118385484
04217 Necroptosis
118385484
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118385484
04622 RIG-I-like receptor signaling pathway
118385484
09152 Endocrine system
04920 Adipocytokine signaling pathway
118385484
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118385484
09171 Infectious disease: bacterial
05132 Salmonella infection
118385484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118385484
04121 Ubiquitin system [BR:
oke04121
]
118385484
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118385484
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118385484
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
118385484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Sina_ZnF
SlyX
DUF4795
Motif
Other DBs
NCBI-GeneID:
118385484
NCBI-ProteinID:
XP_035628546
EnsemblRapid:
ENSOKEG00005018402
LinkDB
All DBs
Position
6:37212874..37230350
Genome browser
AA seq
595 aa
AA seq
DB search
MATQEPSPPSSMESNKPGFPKKILANKLEDKHLCNCCHNLLRRPFQAQCGHRFCSYCFNM
TVRDGPQKCNACIKEDIFEEPTSILKQGCAFPDNAARREVENLSAVCINEGCTWKGNIKE
YELSHEEKCEFMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKERIHDHERACA
YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLLDLHRSLRELEVRVSQISTTSIGPPVQ
GVTSSSSSLGLPGPPTPALPLPPPPAPVPTLTVSTSFTPLPSSVGAALELQLHSEKTKVA
ELGRRCTDLEVKVGTFENVVCVLNREVERFTTTMEAGNRQHRLDQDKIEALSNKVRQLER
TVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFTKKRQDAIAGRAPAMFSPAFYTSKY
GYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSSREHIIDA
FRPDITSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDIIFIKAIVDLTGL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggccacgcaagaaccatcccctccatcgtccatggagagcaacaaacccggcttcccc
aagaagatcctggccaataagctggaggataagcacctgtgtaactgctgtcacaacctg
ctgcggaggcccttccaagcccagtgtggacaccgcttctgttcctactgcttcaatatg
actgtcagagatggacctcagaaatgcaatgcttgtatcaaagaggacatttttgaagag
cccacgtcaattctaaaacaaggctgcgcttttcctgacaacgcagctcgaagagaggtc
gaaaacctctctgctgtctgcatcaacgaaggttgcacttggaaaggcaatattaaagaa
tacgagttgagccacgaagagaagtgtgagttcatgatcatcccctgcccttcctgtaaa
gagcggatccgcttcaacgaacaggaacgccacaacgagcgagagtgccctgagagaacc
ctcaactgcaagtactgcaaggaaccatttcatttcaaaaacatcaaggcccacgacgag
atctgccccaagtaccccatgatctgtgaaggctgtgccaagaagaaaatccccagggag
aagtatgtagaccacattaagttctgcagcaaattcagaacgccgtgcagattccatgtt
gttgggtgtgatatgtcagtggagaaggagaggatccacgaccacgagagggcctgcgct
tacgaacacctcaacctgctgctacactacattatgggcatgaaggtgagcatggagggc
ctgcagccgcagggactggagctagctggacacaagctcctggacctccaccgttccctc
agggagctggaggtccgtgtctcccagatcagcaccacctcgatcgggcctcccgtgcag
ggggtcacctcctcctcttcctccttaggtctcccggggcctcctaccccggctcttcct
ttgcctccacctcccgccccggtcccaaccctgaccgtgtccacctccttcacccccctg
cctagctcggtgggggcggccctggagctgcagctccacagtgagaagaccaaggtggcg
gagctgggacgcaggtgcactgacctggaggtgaaggtggggacgtttgagaatgtggtg
tgtgtgttgaaccgagaggtagaacgcttcaccaccaccatggaggcaggtaacagacag
catcgactggaccaggataagattgaggccctgagcaacaaggtgcggcagctggagagg
acggtgggactgaaggacctgacggtagcggagatggagggcaggctgagagagatgtcg
gccaccacattcgacggcgtcttcgtctggaggatctctgacttcaccaagaagagacag
gacgccatcgctggccgagcccccgccatgttctcaccagcattctacaccagtaaatac
ggctataagatgtgtctgcggatctacctgaatggggacgggacggggcgtggcagtcac
ctttctcttttctttgtggtgatgagaggactgagtgatgctctgctaaaatggcccttt
aaccagaaggtgactctgatgctgctggaccagagtagcagggagcacatcatcgacgcc
ttccggcctgacatcacttcctcctccttccagaggcctgtgagcgagatgaacatcgcc
agcggctgcccgctgttctgcccgctctcaaagcttgacgccaagaactcctacatccgc
gacgacataatcttcatcaaggccattgtggatctcacaggcctttag
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integrated database retrieval system