KEGG   Oncorhynchus keta (chum salmon): 118385484
Entry
118385484         CDS       T09424                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04010  MAPK signaling pathway
oke04137  Mitophagy - animal
oke04141  Protein processing in endoplasmic reticulum
oke04210  Apoptosis
oke04217  Necroptosis
oke04621  NOD-like receptor signaling pathway
oke04622  RIG-I-like receptor signaling pathway
oke04920  Adipocytokine signaling pathway
oke05132  Salmonella infection
oke05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    118385484
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    118385484
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    118385484
  09143 Cell growth and death
   04210 Apoptosis
    118385484
   04217 Necroptosis
    118385484
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    118385484
   04622 RIG-I-like receptor signaling pathway
    118385484
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    118385484
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118385484
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118385484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118385484
   04121 Ubiquitin system [BR:oke04121]
    118385484
Enzymes [BR:oke01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118385484
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     118385484
Ubiquitin system [BR:oke04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    118385484
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 Sina_ZnF SlyX DUF4795
Other DBs
NCBI-GeneID: 118385484
NCBI-ProteinID: XP_035628546
EnsemblRapid: ENSOKEG00005018402
LinkDB
Position
6:37212874..37230350
AA seq 595 aa
MATQEPSPPSSMESNKPGFPKKILANKLEDKHLCNCCHNLLRRPFQAQCGHRFCSYCFNM
TVRDGPQKCNACIKEDIFEEPTSILKQGCAFPDNAARREVENLSAVCINEGCTWKGNIKE
YELSHEEKCEFMIIPCPSCKERIRFNEQERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRTPCRFHVVGCDMSVEKERIHDHERACA
YEHLNLLLHYIMGMKVSMEGLQPQGLELAGHKLLDLHRSLRELEVRVSQISTTSIGPPVQ
GVTSSSSSLGLPGPPTPALPLPPPPAPVPTLTVSTSFTPLPSSVGAALELQLHSEKTKVA
ELGRRCTDLEVKVGTFENVVCVLNREVERFTTTMEAGNRQHRLDQDKIEALSNKVRQLER
TVGLKDLTVAEMEGRLREMSATTFDGVFVWRISDFTKKRQDAIAGRAPAMFSPAFYTSKY
GYKMCLRIYLNGDGTGRGSHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQSSREHIIDA
FRPDITSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDIIFIKAIVDLTGL
NT seq 1788 nt   +upstreamnt  +downstreamnt
atggccacgcaagaaccatcccctccatcgtccatggagagcaacaaacccggcttcccc
aagaagatcctggccaataagctggaggataagcacctgtgtaactgctgtcacaacctg
ctgcggaggcccttccaagcccagtgtggacaccgcttctgttcctactgcttcaatatg
actgtcagagatggacctcagaaatgcaatgcttgtatcaaagaggacatttttgaagag
cccacgtcaattctaaaacaaggctgcgcttttcctgacaacgcagctcgaagagaggtc
gaaaacctctctgctgtctgcatcaacgaaggttgcacttggaaaggcaatattaaagaa
tacgagttgagccacgaagagaagtgtgagttcatgatcatcccctgcccttcctgtaaa
gagcggatccgcttcaacgaacaggaacgccacaacgagcgagagtgccctgagagaacc
ctcaactgcaagtactgcaaggaaccatttcatttcaaaaacatcaaggcccacgacgag
atctgccccaagtaccccatgatctgtgaaggctgtgccaagaagaaaatccccagggag
aagtatgtagaccacattaagttctgcagcaaattcagaacgccgtgcagattccatgtt
gttgggtgtgatatgtcagtggagaaggagaggatccacgaccacgagagggcctgcgct
tacgaacacctcaacctgctgctacactacattatgggcatgaaggtgagcatggagggc
ctgcagccgcagggactggagctagctggacacaagctcctggacctccaccgttccctc
agggagctggaggtccgtgtctcccagatcagcaccacctcgatcgggcctcccgtgcag
ggggtcacctcctcctcttcctccttaggtctcccggggcctcctaccccggctcttcct
ttgcctccacctcccgccccggtcccaaccctgaccgtgtccacctccttcacccccctg
cctagctcggtgggggcggccctggagctgcagctccacagtgagaagaccaaggtggcg
gagctgggacgcaggtgcactgacctggaggtgaaggtggggacgtttgagaatgtggtg
tgtgtgttgaaccgagaggtagaacgcttcaccaccaccatggaggcaggtaacagacag
catcgactggaccaggataagattgaggccctgagcaacaaggtgcggcagctggagagg
acggtgggactgaaggacctgacggtagcggagatggagggcaggctgagagagatgtcg
gccaccacattcgacggcgtcttcgtctggaggatctctgacttcaccaagaagagacag
gacgccatcgctggccgagcccccgccatgttctcaccagcattctacaccagtaaatac
ggctataagatgtgtctgcggatctacctgaatggggacgggacggggcgtggcagtcac
ctttctcttttctttgtggtgatgagaggactgagtgatgctctgctaaaatggcccttt
aaccagaaggtgactctgatgctgctggaccagagtagcagggagcacatcatcgacgcc
ttccggcctgacatcacttcctcctccttccagaggcctgtgagcgagatgaacatcgcc
agcggctgcccgctgttctgcccgctctcaaagcttgacgccaagaactcctacatccgc
gacgacataatcttcatcaaggccattgtggatctcacaggcctttag

DBGET integrated database retrieval system