Oncorhynchus keta (chum salmon): 118386170
Help
Entry
118386170 CDS
T09424
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00260
Glycine, serine and threonine metabolism
oke00270
Cysteine and methionine metabolism
oke00670
One carbon pool by folate
oke01100
Metabolic pathways
oke01230
Biosynthesis of amino acids
Module
oke_M00035
Methionine degradation
oke_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
118386170
00270 Cysteine and methionine metabolism
118386170
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
118386170
Enzymes [BR:
oke01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
118386170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Glyco_tran_WecG
DUF7317
Motif
Other DBs
NCBI-GeneID:
118386170
NCBI-ProteinID:
XP_035629561
LinkDB
All DBs
Position
7:complement(23294716..23322752)
Genome browser
AA seq
612 aa
AA seq
DB search
MSSVFSSTDSVGAEPSVCPNAAKLSNAQANEVAAILKGGSKVNGEAMLNGHKLSMNGSAQ
VNEDSAGHKAQNGSVHVNGHEGENGLEKAAAGVEERLWIRPDLPSKCTWKLGGSSVESPH
CHSELTEAPSILPNILGKIGDTPLVRMNKIPKAFGLKCELLAKCEFFNAGGSVKDRISLR
MVEDAERNGILKPGDTIIEPTSGNTGIGLALASAVKGYRCIIVMPEKMSMEKVDVLRALG
AEIVRTPTAARFHSPESHIGVAWRLKNEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCD
GKVDMLVAGAGTGGTITGIARKLKERCPNIKIVGVDPEGSILAEPEELNKTDKTQYEVEG
IGYDFIPTVLDRSVVDRWYKSNDDESFAMSRMLIREEGLLCGGSSGTAMAAAVRMATELK
EGQRCVVILPDSIRNYMSKFLSDNWMCDKGFLTPENLMVSKPWWWNLSLQGLNLFSPLTV
LPSVNIKKTIKILKEKAFDQAPVVDESGVILGMVTLGNMLSSVLAGKVKASDPVAKVLYK
QFKQVRLTDNLGKLSRILETDHFALVVHEQIQYMEDGSPCLRQMVFGVVTAIDILNYITT
RERTLSECSLTD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggttttctccagcacggactctgtaggcgccgagccctccgtctgccccaac
gcagccaagctcagcaacgcacaagccaacgaagtggctgccattttgaaagggggctcc
aaggtcaacggagaagccatgttgaacggccacaagctctccatgaatggatcggctcaa
gtgaacgaggacagtgctggccataaggcccagaatgggtcggtccatgtgaacgggcac
gagggggagaacggtctagagaaggcagccgcaggcgtggaggagaggctgtggatccgt
cctgacttgcccagcaaatgcacttggaaactgggcgggtcttccgtagagtcccctcac
tgccactctgaactgactgaagctcccagcattctacccaacatcctcgggaagatcgga
gacacacctctggtccgcatgaacaagatccccaaagccttcggccttaagtgtgaactc
ttggccaagtgtgagttctttaacgcagggggcagtgtgaaggaccgtatcagtctaagg
atggtggaggatgcagagagaaatgggatcctcaaaccaggagacaccatcatcgagccc
acctctggcaacacaggtattggtctggccctggcctctgcagttaaaggctatcgctgc
atcatcgtcatgcctgagaagatgagcatggagaaggtggatgtgcttagagccttgggg
gcggagatcgtgcgtaccccaaccgctgcccgctttcattcgccggaatcccacataggc
gtggcctggcgtctgaagaatgagattcccaactctcatatcctggaccagtaccgtaac
cctagcaaccccctggcccactacgacaccactgccgaggagatcctggagcagtgtgat
ggtaaggtggacatgttggtggcaggagctggcaccggtggcaccatcactggcatcgcc
cgcaagctgaaggagagatgccccaacatcaagatcgtgggtgtggaccctgagggttct
atactggctgagccagaggagctgaacaaaacagataagacccagtacgaggtggagggc
atcggatacgacttcatccctactgtactagacagatctgtagttgacaggtggtataag
tccaatgacgatgagtcttttgccatgtcacgcatgctgatcagggaggaggggcttctc
tgcggaggtagttcaggtacggccatggctgcagcagttagaatggccacagagctgaag
gagggccagcgctgtgtcgtcatcctgcctgactccatccgcaactacatgtctaagttc
ctgagtgataactggatgtgtgataagggcttcctaaccccagaaaacctgatggtgtcc
aaaccctggtggtggaacctgagtctgcagggtctgaacctattttcccccctcactgtg
ctgccttcagtcaacatcaagaagaccatcaagatcctcaaggagaaggccttcgaccag
gcacccgtcgttgatgagtcaggcgtgatcctagggatggttaccctgggcaatatgttg
tcttcagtactggctgggaaggtcaaggcctctgaccctgtcgccaaggtgctttacaaa
caatttaaacaggtgcgactgacagataacctgggtaagctgtcccgtatcctggagaca
gatcactttgccctggtggtgcatgagcagatccaatacatggaggatggctcgccctgt
cttagacagatggtattcggggtggtgaccgccattgacatacttaattacatcaccacg
cgcgagcggacgctgtcagagtgctcgctgaccgactag
DBGET
integrated database retrieval system