KEGG   Oncorhynchus keta (chum salmon): 118388499
Entry
118388499         CDS       T09424                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain
  KO
K06752  MHC class II antigen
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04145  Phagosome
oke04514  Cell adhesion molecules
oke04672  Intestinal immune network for IgA production
oke05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118388499
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118388499
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    118388499
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118388499
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118388499
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118388499
  Exosomal proteins of epithelial cells
   118388499
  Exosomal proteins of breast milk
   118388499
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 Ig_2 I-set ig C2-set_2
Other DBs
NCBI-GeneID: 118388499
NCBI-ProteinID: XP_052382821
LinkDB
Position
10:31310740..31314991
AA seq 242 aa
MSLCCLNMKTSMIVLILCCQVYAEDKVLHIDIHIGGCSDSDGVDMYGLDGEEMWYADFNK
KEGVMPLPPFADPLTYRGAYEVAVGNQGVCKANLATFIKAYKNPPETIDPPHSSIYPRDD
VELGVENTLICHVSGFHPAPVRVRWTRNNQNVTEGVRISTPYPNTDFTLNQFSSLSFTPE
EGDIYGCTVEHKALTEPLTRIWEAELSQPSVGPAVFCGVGLTLGLLGVATGTFFLIKGNQ
CN
NT seq 729 nt   +upstreamnt  +downstreamnt
atgtctctctgttgtctgaacatgaagacctctatgattgtcctcatcctctgctgtcag
gtgtatgcagaagacaaagttctgcatattgatatacatattggtggatgcagtgattca
gatggagtggatatgtatggactggatggtgaagagatgtggtacgcagacttcaacaaa
aaggagggagtgatgccgctgcctccgtttgcagatccattgacctaccgtggagcttat
gaagtggctgtaggtaatcagggggtatgcaaagcaaacctggccacatttataaaagct
tacaagaacccaccagagacaatagaccctcctcacagcagcatctaccccagggatgat
gtggaactgggggtggagaacactctcatctgccacgtcagtgggttccaccctgcacct
gtcagagtcaggtggaccaggaacaatcagaatgtgaccgagggagtgcgtatcagcacc
ccctaccccaacactgatttcaccctcaaccagttctccagtctgagcttcaccccagag
gagggagacatctatggctgtactgtggagcacaaggcccttactgagcccctgacacgg
atctgggaagctgagttgagccagcccagtgtgggtcctgctgtgttctgtggagtgggt
ctgactctggggctgctgggagtggctaccggaacgttcttcctcatcaaagggaaccag
tgcaactga

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