Oncorhynchus keta (chum salmon): 118388944
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Entry
118388944 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
oke04144
Endocytosis
oke04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118388944
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118388944
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118388944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118388944
04121 Ubiquitin system [BR:
oke04121
]
118388944
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118388944
Membrane trafficking [BR:
oke04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
118388944
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
HECT type E3
118388944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
118388944
NCBI-ProteinID:
XP_035634460
LinkDB
All DBs
Position
10:complement(52529280..52590644)
Genome browser
AA seq
870 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDGQSKKTEKCNNTHNPKWKQSLTVILTP
FSKLIFRVWSHQTLKADILLGMATLEISETLKSNDMKLSEVVHTLQLCSDRDHTDVVGDL
SVCLDGMQVDPETFTSAERDHVAVPNGEVRQNRDSVNSDNIPPRSSRDTSPSSDSTEDWV
IVPNGHTVNSMGSPAPSPGGSKSTRPPRPARPPPPTPRRPAASPASSSSSTHSEVSEPPA
SYGSSLASASGASSDPAQENGAAPTQAASTPPAIGAPAGAPPSGGPPRVIPNGPLPPGWE
QRVDQNGRMYFVDHIEKRTTWDRPDSLPSGWERRVDPMGRVYFVDHITRTTTWQRPTQES
VRNYEEWQHQRSQLQGAMQQFNQRFIFGLQDQQIAAANKEFDPLGPLPHGWEKRTDTNGR
VYFVHHTTRMTQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGK
SSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDSFQQMMSFHPQDL
RRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPD
HLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKD
NNLEECGLEMYFSVDKEILGEVTTHELKPDGGNVLVTEENKEEYIRLVAEWRLSRGVEEQ
TQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLVDWQRHTIYRHYARSSKQILWFW
QFVKEMDNEKRMRLLQFVTGTCRLPMGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFN
RLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaacttcaagttactgtgctgtcggccaaactgaaggagaacaaaaagaac
tggtttggccccagtccgtacgtggaggtggctgtggacggccagtcgaagaagaccgag
aaatgcaacaacacacacaaccccaaatggaagcagtcactgacagtaattctcacacct
ttcagtaagctcattttccgggtatggagtcatcagacgctgaaagccgacatcttattg
ggaatggctacattggagatcagtgaaaccctaaagtccaatgatatgaaactctctgag
gtggtgcacaccctgcagctgtgttcagaccgagaccacactgacgtggtgggggacctg
tcagtctgtctggacggcatgcaggtggacccagagacattcacctctgcagagagggac
catgttgctgttccaaacggggaggtgagacagaacagagatagtgtcaacagtgataac
ataccacccagatccagcagggacacgtccccctccagtgactccacagaggactgggtc
atcgtccccaacggccacacggtcaacagcatgggttctcctgccccatccccagggggc
tccaagtccacacgtccccccagacctgcacggcctcccccacccaccccccgcagacca
gccgcatccccagcctcctccagcagctctacccatagcgaggtgagtgagcccccggct
tcatatggctcgtccctggcctcagccagcggggcctcctcagaccccgctcaggagaac
ggagcagcacccacacaggcagccagcacccccccagccatcggggcaccagccggtgca
cccccatctggtgggcccccccgagtcatccctaacggcccactgcctccaggctgggag
cagagggtggaccagaatggccgcatgtatttcgtggatcacattgagaagaggacgaca
tgggaccgaccagactctctcccctctgggtgggagcggcgtgtggaccccatgggcagg
gtgtacttcgtggaccacatcacccggaccaccacgtggcagcgccccacgcaggagtct
gtgcgcaactatgaggagtggcagcaccagcgcagccagctgcagggggccatgcagcag
ttcaaccagaggttcatttttgggctccaggatcagcaaatagctgcagcaaacaaagag
tttgacccacttgggccgctgccacacggctgggagaagcgaacagacaccaacggcagg
gtttattttgttcaccacacaacgcggatgactcagtgggaggacccacggacacaaggg
ctgctgaatgacaagcccctacctgaaggctgggagatgaggttcacagtggatggcatc
ccctactttgtggaccacaaccggagaaccaccacctacatagaccctcgcacgggcaaa
tcctcccttgagaacgggccccagatcacctacgtcagggacttcaaagcgaaagtgcag
tacttcaggttctggtgtcagcaactgtcaatgccacagcacatcaagatcaccgtcacc
cgcaaaactctgtttgaggattcattccagcaaatgatgagctttcatccacaagatctc
aggcggagactgtggatcattttccctggagaggaaggcttggactacggaggagtggca
agggagtggttcttcttgctatcccacgaggtgctgaacccaatgtactgcctgtttgag
tatgccggcaaggacaactactgtctccagatcaaccctgcctcctatatcaaccctgac
cacctcaagtacttcaagttcattggaagattcattgccatggccttgttccatgggaag
ttcatcgacacaggattctccctgcccttctacaagcgcatcctgaacaaacccctggcc
ctgaaggacctggaatccatcgacccggaattctacaactccctcatctggatcaaggat
aacaacttggaggagtgtggtctggagatgtacttctctgtggacaaggagatcctgggg
gaggtcaccactcacgagctgaagccagacggaggcaatgtcttggtcactgaggaaaac
aaagaggaatacatcaggctggtggcagagtggaggttgtccagaggggtggaggagcag
acccaggccttcttcgagggcttcaatgaggtccttccccagcagtacctgcagtacttt
gacgccaaggaactggaggtgatgctgtgtggcatgcaggagatagacctggtggactgg
cagaggcacaccatctacaggcactacgcacgcagcagcaagcagatcctctggttctgg
cagtttgtgaaggagatggacaatgagaaacgtatgaggctgctgcagtttgtcaccggc
acctgtcggctccccatgggtggcttcgctgacctcatggggagtaatggcccacagaag
ttctgcattgagaaggtgggcaaagaaaactggcttccaagaagtcacacttgctttaat
cgactggacctgcccccttacaagagctacgagcagctgaaggaaaaactgatgtttgcc
attgaggaaactgagggcttcggacaggagtag
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