Oncorhynchus keta (chum salmon): 118390534
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Entry
118390534 CDS
T09424
Name
(RefSeq) short transient receptor potential channel 5 isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oke01009
]
118390534
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oke04040
]
118390534
Protein phosphatases and associated proteins [BR:
oke01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118390534
Ion channels [BR:
oke04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118390534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_5
Ank_3
PKD_channel
LHD_TRPY1
YVC1_C
Band_7
Motif
Other DBs
NCBI-GeneID:
118390534
NCBI-ProteinID:
XP_035637084
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Position
11:50643697..50677792
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AA seq
1039 aa
AA seq
DB search
MMNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSAEERAYLTAVEKGDYAGVKLALQEAE
IYYNINVNCLDPLGRSALLIAIENENLEVMELLLNHGVHVGDALLYAIRKEVVGAVELLL
SHRRSSREKQVPNLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRC
DCVACVSSSEVDSLRHSRSRLNVYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENE
FRQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDLSEELDPQDCRDLAKLKLAIKY
HQKEFVSQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFTIGLLFPIFSLVYLLAPRSAL
GLFIKKPFIKFICHTASYLTFLFLLLLASQHIVRTDLHVQGPLPTVVEWMILPWVLGFIW
AEIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKIVAYFKYNSSRPREEWEMWHPTL
IAEGLFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSVWYLCVWTHNRLCGRDHPSPDNPRKHENLKEFTERHADNLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGDRKPPRRTYSSS
SEATQQDEANEEEAAGQAQGQSRDQGAKGVSFSTSIAERKNKDSGFSVSALFKSMSGAEG
AVDNKPKCNGLRFSSSPPPSAALTRSSGRLQRFSKSKRDSIRRLGLLFSRMNGHVPEPRS
PPPRMHQPTYSISGGLLRQPTTWPDIQIPPNPPVTHSLFHLGVNLNELPHAPPQDLPLGS
PQQANGSDSLLLRTAGHSLSPAGHSLPPLHCASSITASSSRAVLLGSSEDMFEGWIGPCD
ELDSSEGGAEQEDSITTQL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccatggcccagctgtactacaagaaggcgagctactcgccgtaccgcgac
cgcatcccgttgcagatcgtgcgggcggaagcggagctgtcagcggaggagcgggcgtac
ctgacggcggtggagaagggcgactatgccggggtgaagctggccctgcaggaggcggag
atctactacaacatcaacgtgaactgcctggacccgctggggcgcagcgcgctgctcatc
gccatcgagaacgagaacctggaggtgatggagctgctgctcaaccacggcgtgcacgtg
ggcgacgcactgctctacgccatccgcaaggaggtggtgggcgccgtggagctgctgctg
tcccatcgcaggtccagcagagagaaacaggtgcccaacctgatgatggatacccagttc
tcagagtttacccctgacatcacacccatcatgctggcagctcacaccaacaactatgag
atcatcaagctgctggtccagcgcaaggtgaccatcccccggccccaccagatccgctgc
gactgcgtggcgtgtgtgtccagctccgaggtggacagcctgcgtcactcacgctcccgc
ctcaacgtctacaagaccctggccagcccgtccctcatcgccctgtccagcgaagacccc
atcctgactgccttccgcctgggctgggagctgaaggagctaagcaaggtggagaacgag
ttccgtcaggagtacgaggagctgtcccagcagtgtaagctgtttgccaaggacctgctg
gaccaggccaggagctctagagagctggagaccatcctcaaccaccgcgatgacctcagt
gaggagctagacccacaagactgccgtgacctggccaagctcaaactagctatcaagtac
caccagaaagagtttgtgtcccagccaaactgtcagcagcttctggccaccctgtggtac
gacggtttccccgggtggcgcagacgccactgggcggtcaagctggtcacctgcttcacc
atcggcctgctcttccccatcttctccctggtctacctgctggcccctaggagtgccctg
ggcctcttcatcaagaagcccttcatcaagttcatctgccacacagcctcctacctgact
tttcttttcctcctcctcctggcctcccagcacatcgtgagaacagacctgcacgtccag
ggcccgctacccaccgtggtggagtggatgatccttccctgggtgctgggcttcatctgg
gctgagataaaggagatgtgggacggcggcttcactgagtacgtccatgactggtggaac
ctgatggactttgccatgaactctctctacttggccaccatctcactcaaaatagttgct
tacttcaagtacaacagctctcggccgcgggaggagtgggagatgtggcacccgacgctg
atcgccgagggcctgtttgctatcgccaacatcttcagctccctgcgcctcatctccctg
ttcacagccaactcccacctggggcctctgcagatctccctgggacgcatgttgctggac
atcctcaagttcctcttcatctactgcctggtcctgctggccttcgccaacgggctcaac
cagctgtacttctactacgagaccaaggcctcggacgagcccaacaactgcaagggcatc
cgctgtgagaagcagaacaacgccttctctacgctgtttgagacgttacagtccctgttc
tggtcgatattcggcctgctcaacctgtacgtgaccaacgtgaaggcacgccatgagttc
acagagtttgtgggagccaccatgttcggtacctacaatgttatctccctggtggtgctg
ctcaacatgctcatcgccatgatgaacaactcctatcagctcatcgctgatcatgcggac
attgaatggaagtttgctcgcaccaagctgtggatgagttattttgacgagggaggaact
ctccctccgcccttcaacatcatccccagccccaagtcagtgtggtacctgtgtgtgtgg
acgcacaaccgcctgtgtggacgggaccatcccagtcctgacaacccgaggaaacacgag
aacttaaaggagttcacggagcggcatgctgacaacctgattcagaaccagcattatcag
gaggtgatcaggaacctggtgaagaggtatgtagcagccatgatccgcagtgctaagaca
gacgagggtctgacagaggagaattttaaggagctcaagcaggacatctccagtttccgc
tacgaggtgttagacctgttgggggacaggaagcctccgcggaggacctactcatccagc
agtgaggctacccagcaggacgaggccaatgaggaagaagcggctggacaggcccagggt
cagtccagggaccaaggggctaagggggtatccttcagcacgtctatcgctgagaggaag
aacaaggactctgggttcagcgtctctgccctctttaagtccatgtcaggggcagagggg
gcagtggacaacaaaccaaagtgcaacgggctcaggttctcctcctcccccccgccctct
gctgcgttaacccgcagtagtggccggctgcaacgcttctccaagtccaaaagagactcc
atcaggcggctgggcctgctcttctcccgcatgaacggacacgtcccagagcccaggtcc
cctcctcccaggatgcaccagcccacctacagcatctcaggcggtctgcttcggcagccc
acaacctggccggacatccagatcccccccaatcccccggttacacacagcctgttccac
ctgggggtgaacctgaacgagctaccacatgcccctccccaggacctgccattggggtca
ccccagcaggctaacggaagtgacagtctgctcctgcgaaccgcgggccactctttatca
ccggcaggccactccctgccacccctgcactgtgcttccagcatcacggcctccagctcc
cgggctgtcctcctgggctctagtgaggacatgtttgagggctggataggaccttgtgac
gagctggactcctctgaggggggggctgagcaagaggactccatcacaacacagctttag
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