Oncorhynchus keta (chum salmon): 118390546
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Entry
118390546 CDS
T09424
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04020
Calcium signaling pathway
oke04510
Focal adhesion
oke04540
Gap junction
oke04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118390546
04020 Calcium signaling pathway
118390546
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118390546
04540 Gap junction
118390546
09142 Cell motility
04810 Regulation of actin cytoskeleton
118390546
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oke01001
]
118390546
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oke04090
]
118390546
Enzymes [BR:
oke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
118390546
Protein kinases [BR:
oke01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
118390546
CD molecules [BR:
oke04090
]
Proteins
118390546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
Motif
Other DBs
NCBI-GeneID:
118390546
NCBI-ProteinID:
XP_035637112
LinkDB
All DBs
Position
11:51245868..51266280
Genome browser
AA seq
1104 aa
AA seq
DB search
MWRGTLPRVLSIHTGTMELGLAKSLPLVAIFTVLLQFCPEVFSLELSPSEKEVILSTNSS
FTVVCSGWSKVTWKSPHDPSLEGVAVEDRGTTSVLVLHNVTWRHSGNYICEEPSTEEAKD
ISVFVPDPEEWFLPLEQAVVMKEGEEGTIPCVVTDPGINVTLYERASKARVEGTYHPSKG
FTAILKDSSYICRGAMNGEEKASQVYYVYSIVVPKSMNAFMTLSKTVLKQGEALMVNCTV
EEAEMVYFEWDFPRKETIEPLTDFLSEIRIRSFLNISSVTLEDSGQYICRVQHPFSGKSA
MDNLTVTVLERGFVDLEPSINTNVSALQYQSVALTVQIEAFPKPQVLWTRDNTTLTGETV
SIDTREVHETSYLSTLTLVRVRMEQRGLYTVQVANEDDVKEITFDLQVKSSPKIIDLSDQ
HIDQGHGVLCVTEGVPTPTVHWYSCESIGKCSNKTTAWKSLSADQENVSIQMNVSYIEAS
GVNQVRSLLTFQTMGGITSVRCEARNERGRRAWDIKLVSNSLFSQVAVLAAVLALVVIAV
IFLIILIALWRKKPRYEIRWKVIESVSSDGHKYTYMDPMHLPYDCVWEVPRDSLVLGHTL
GSGAFGRVVEATAYGLGHSQSTTKVAVKMLKSTARTSETQALISELKIMSHLGPHLNIVN
LLGACTKRGPIYLITEYCCYGDLVDYLHRNKHTFLQYYADKNRRDADMCRNSTESTVQIQ
GKSECDGGYMDMTKEDSLNYVPMQELSDNIKYADIETSVNETPYHQDNNYQGQGQERADV
ALSISDSPILSYTDLVGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLA
RDVMNDSNYIAKGKTFLPLKWMAPESIFQNLYTTLSDVWSFGILLSEIFTLGGTPYPDIP
MNEQFYTALKRGYRMPKPAHATDEIYDIMCKCWDEKFKKRPLFSSLVNLTGNLLTDAYKK
KYTQVNESFLKSDHHAAIRSKPIPAGNPAVSSDDPSSGDRMGQETGEIEETGTEAGPSQT
DYIIAIPDIHVAEEAEAGGEVLDTATQSTSSPPNTTDQADTASLDGPEAPQEEPVPTEEA
VLAPTQEDKLPQSPCTPEVEESFL
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaggaactctcccaagagtgttatcaattcacaccggcactatggagctgggc
ttggcaaagtctctgcctttggtggccatctttacagtgctgctgcagttttgtccagag
gtcttcagtctggagctcagccccagtgagaaggaggtcatactgagcaccaactcctcc
ttcacggtggtctgttctggttggagcaaggtgacctggaagtctccccacgaccccagc
ctggagggagtggctgtggaggacaggggaaccaccagtgtgctggtcctccacaacgtc
acctggaggcactctgggaactatatctgtgaagagccctctacagaggaggccaaggac
atatcagtgtttgtaccagaccctgaggaatggtttcttcccctggagcaagcagtagtg
atgaaggagggagaggaaggtaccattccctgcgtggttactgaccctggcattaacgtg
accctgtacgagcgggccagcaaggcccgtgtggagggaacataccaccccagtaaaggg
ttcaccgccatcctgaaagacagctcctacatctgccgaggtgccatgaacggagaggag
aaggcgtcccaggtgtattatgtctacagcattgtggtccccaaatccatgaacgccttc
atgacactctcaaagacggtgctgaaacaaggcgaggccttaatggttaattgtactgta
gaagaagcagagatggtttacttcgaatgggattttcctcgtaaagagacaattgagcca
ctgacagactttctatcggagattagaatccgctccttcttgaacatctccagtgttact
ctggaggactctggccagtacatctgccgagtgcagcaccctttttccggaaagtcagcc
atggataatctcactgtcactgttctggaacggggctttgtggatttggaaccctccatc
aacaccaatgtttcagcgctgcagtatcagagcgttgcgctcacagtgcagatcgaagcg
tttcccaaacctcaggtgctctggaccagagacaacaccacccttactggggaaactgtc
tccattgacaccagagaggtgcatgagaccagttacctcagtactctgaccttggtacgg
gtccggatggaacagagggggctctacactgtccaggtggccaatgaagacgacgtcaag
gagataacctttgatcttcaagtcaagtcttccccgaagataatagatttgtctgaccag
cacatagaccagggccacggagtgctctgtgtcacagagggggtccccacacccaccgtc
cactggtacagctgtgaaagcattggaaaatgcagtaataagaccacagcatggaagtct
ctgtcggctgaccaagagaacgtcagcatccagatgaacgtcagctacatcgaggcctca
ggggtcaaccaagtccgcagccttttgaccttccagaccatggggggtattacatcagta
cgctgtgaagcccgcaacgagagagggcgcagggcctgggacatcaaactggtctcgaac
tctctgttctcccaggtggctgtcttggctgcagtgttagccctggtggtcattgccgtc
atcttcctcatcatcctcatcgccctttggagaaagaagccccggtatgagatccgttgg
aaggtgatcgagtcagtgagctcagatggccataagtacacctacatggaccccatgcac
ctgccatatgactgtgtctgggaggttccccgggatagcctggtcctgggtcacactctg
ggttctggagcatttgggagggtcgtggaggccacagcctatggccttggtcactctcag
tccaccaccaaagtggctgtgaagatgctcaagtccacagcaaggacaagtgagactcag
gctctgatatctgagctgaagataatgagtcaccttgggccccatctaaacatcgtcaac
ctactgggggcttgtacgaaacgaggtcccatttacctcataactgagtactgttgctat
ggtgacctggttgactaccttcaccgcaataagcataccttcctgcagtactacgcagac
aaaaaccgcagggatgctgatatgtgcaggaacagcacagagagtacagtccaaatccag
ggaaaaagtgagtgcgatgggggttacatggacatgaccaaggaagattctttaaattat
gtcccaatgcaagagctgagtgacaacatcaagtatgcagacatcgagacttcagtcaat
gagacaccctaccatcaggacaacaactaccaaggacaaggccaagagagagcagacgtc
gcgttgtctatcagtgactccccaattctgagctacacagatctggtgggctttagctac
caagtggctaagggcatggacttcctggcatccaagaattgtgttcatcgtgacctggct
gccagaaatgttctcatctgcgagggaaagctggtgaagatctgtgattttggcctggcc
cgtgatgtcatgaacgactccaactacatagccaaaggcaaaacattcctgccactgaag
tggatggctccagagagtatcttccagaacctctacacaaccttgagcgatgtttggtct
tttggcattctgctttcagagatctttactctaggaggaacgccctatcctgacattccc
atgaatgaacagttctacactgccttgaagagaggctacaggatgcctaaacctgctcat
gctacagacgagatctatgatatcatgtgcaagtgttgggatgagaaattcaagaagagg
ccactcttctcctctctggttaatttgacgggaaacctgctgactgatgcttacaaaaag
aaatacacccaggtgaatgagagctttctgaagagcgaccaccatgctgcaatcaggtcc
aaacctataccagcagggaacccggctgtgtcttcagatgacccctcctcaggggatcga
atgggtcaggagacaggggagatagaggagactgggacggaggctggcccctcccagact
gactacataatcgccatcccagatatccatgtagccgaagaggcagaagcaggtggtgag
gtgctggacaccgccacacagagtacatcaagtcctccaaacacaaccgaccaggctgat
acagcctccctggatggaccagaagcaccccaagaagaaccagtacccacagaggaagcg
gtgcttgcccccacgcaagaagacaagctcccccagtctccatgtacccctgaagtggag
gagagtttcctgtag
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integrated database retrieval system
