Oncorhynchus keta (chum salmon): 118390890
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Entry
118390890 CDS
T09424
Name
(RefSeq) rap guanine nucleotide exchange factor 6-like isoform X1
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04517
IgSF CAM signaling
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118390890
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118390890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
ABhydrolase-like_N
Motif
Other DBs
NCBI-GeneID:
118390890
NCBI-ProteinID:
XP_052313597
LinkDB
All DBs
Position
12:4766986..4903735
Genome browser
AA seq
1676 aa
AA seq
DB search
MTMTGSMETSFKQALKKPPSQRTTEDLHTVYCHLYHMDVLSHLREHQLRSMCTSARYERH
EANHILFYQDSLATCWYILLSGSVFVKEHMYLARCCFGKQLGGRRGCECITLEPTEMIVV
DNASEVEERALQREASQRRSRRRFRKVNPRGERELITDGQEPTDYAYNQLPGDLNKMHLT
DHPHSQGMHVPPSQSGCSIASDSGSSSLSDIYQATESEMGDVDLSGLPEAAVDSEEEEEE
DEDLERTSDTLLGRDLVRECLEKDPVDRNDDDIEQLLEFMHQLPAFANMTMSVRRDLCTV
MVFEVVEQAGTTILKDKQELDLWYVILNGAVEISHPDSRMETLCMGNSFGISPSLDKQYM
SGVVRTKGDDCQFVCIAQEDYWRILNHVEKNTHKVEEEGEIVMVKEHRELDRSGTRKGHI
VIKGTPERLILHLVEEPSVVDPTYIEDFLLTYRTFLSSPMEVGKKLLEWFKVDSLRDTVT
RIVLLWVNNHFNDFEGDPAMTRFLEDFEKLLETTKMKGHLRLLNIACAAKAKWRQITLQK
PSRESPLYFSLHGGSERGFGIFVESVEGGSKAAEAGLKRGDQIMEINGQNFENISYIKAM
DFLRNNTHLSLTVKTNIFVFKELLSRIVHEKKNGVPHIPKIQEKKGNRFSIPDLPGDMEF
PTDHKATKKMKANTVSGGRNKIRKMLEKTRFSILPPKPFSDGGVGQSQDDSIVGTKQCRH
SVAIMPIPGSLSSSSPDLLQPATNVLDFSNPAAVGFYYIPDQVIRVFKADQQSCYIIISK
DTTAKDVVSHVVNEFGLSAAPENYSLCEVSVSPEGVIKQRRLPDQLSKLADRIQLNGRYY
LKNNMETETLCSDDDAQELLKESHITLLQLSTVEVAAQLSMRDFELFRNIESTEYVDDLF
KLLDSSGGVQQTRLKQFEEVINQETFWVATEILREPNAMKRMKTIKHFIKIALNCRECKN
FNSMFAIISGLNLAPIARLRSSWEKLPSKYDKLFRDLQDIFDPSRNMAKYRNVLSSQSMQ
PPIIPLFPVVKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVVRMTSANMDPALMFRQ
RKKRWKSLGSLSQGSTNSNMLDVQGGAHKKRVRRSSLLNAKKLYEDAQMARKVKQYLSNL
AVETDEEKHQIMSLQCEPVYSTLSKNLSERRSTKSDISPVSLRSALPGGKAQNRVSQVLQ
IQVPLYPQRKKSTAKDIHATHNSSSPLVIKRPPSSQLSQSEDSPWSGKRSAEDTVSIVSS
LHSSPTISPQGSPRKVGGMAKPQHNSNSQMNMSGSSSSLTSEASTKAGTAGTRSYGIGYA
LMPAVKSDNLSDSSHSEISSRSSIVSNCSVDSMPAGPVEERQGTKARDTTEAPGITMQLT
HADSDCSQPSTSSLARGQVMRGSTFTSSTSTEELTPDHVSLDSVADSGRGSWTSCSSNSH
DSFQSLPVPLLGRPPTWDHLVPGGFRHTQLAGPIVEVEAGPAWVGVAGGPGAGSGGGEDA
KRLSRDSSELNQSRQSWASSSSLSDTYEGNYGTIKRRTTEGVSAAPGESPDVPQSTDPVY
KMVTSSTEKGLIVYCVTSPTKDDRYRGPPPTPPGYQGLTLVDGQDGAPLRPSHLRPPDYS
VALQRSKLLQSPGGLVEARRLGVNLPHHESQSQSRPASVCLQGLGDSEDDEQVSAV
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgactggatcgatggaaacttctttcaaacaagctttaaagaaacctccatca
caaaggacaacagaggacctgcacaccgtttactgtcacctctaccacatggatgtcctg
tcccacctcagggagcaccagctcaggtcgatgtgtacctcagccaggtatgagagacac
gaagctaaccacatcctgttctaccaagacagcctcgccacatgttggtacatcctcctc
tccggctcagtcttcgtcaaggagcacatgtacttggctagatgctgctttggcaagcag
ctggggggcaggcgaggctgtgaatgcatcactttagagccgacagaaatgatcgtggtg
gacaatgccagtgaggtcgaggagagggcgttgcagagggaggcgtcccagagacgttcc
cgccggcgctttcgcaaagtcaacccacggggagagcgggaactgatcactgacggccag
gagcccacggattatgcgtataaccagcttcccggagacctcaacaagatgcaccttact
gaccacccccacagccaggggatgcacgtgccgcccagccaatcaggatgcagcatcgcc
agtgattcggggagcagtagcctatcagacatctaccaggccacggagagcgagatgggt
gacgtggacctgtctgggctcccggaggcggcggtggactctgaggaggaggaggaggag
gacgaagacctggagaggacgtcggacaccctactgggtagagaccttgtccgcgagtgc
ctggagaaggaccctgtggaccgcaacgatgacgacatcgaacaactgttggagttcatg
caccagctgccagcctttgccaacatgaccatgtcagtccggagggacctgtgtactgtc
atggtgtttgaggtggtggagcaggcggggaccacgatcctaaaggacaaacaggagctg
gacctgtggtatgtgatcctgaacggggcggtggagatcagccatccagacagccgcatg
gagaccctctgcatgggcaacagcttcggcatctccccctccctggacaagcagtacatg
agcggagtggtgcgcaccaagggggacgactgccagtttgtgtgcatcgcccaagaggac
tactggcggatcctcaaccatgtggagaagaacacgcacaaggtggaggaggagggagag
atcgtgatggtgaaggaacatcgcgagctggaccgcagcggcaccaggaaggggcacatc
gtcatcaagggcaccccagagcgtttgatattgcacctggtggaggagccatcggtggtt
gaccccacctacatcgaagacttcctcctcacctaccgcaccttcctctccagccccatg
gaagtcggcaagaagctgctcgagtggttcaaagtcgacagcctcagagacacggtgaca
cgcatagtgttgttatgggtgaacaaccatttcaacgactttgaaggtgacccggccatg
acaaggttccttgaagacttcgagaagctgctggaaaccacaaaaatgaagggtcacctg
aggctgctgaacatagcgtgcgcagccaaggccaagtggaggcagatcaccctgcagaaa
ccatccagagagtccccgctctacttcagcctgcatggcggaagcgagaggggcttcggc
atcttcgtggagtcggtggaggggggcagcaaggccgcggaggccggactcaaacgggga
gaccagataatggagataaatggtcagaactttgagaacatctcctacatcaaagctatg
gacttcctgaggaacaacacacacctctccctcacagtcaagaccaacatcttcgtgttc
aaagagctgctaagccggatcgttcacgagaagaagaatggcgttccgcacattcccaag
atccaggagaagaagggcaaccgcttctccatcccggacctgcctggagacatggagttc
cccacagaccacaaggccaccaagaagatgaaggccaacaccgtttctggaggacggaac
aagatcaggaagatgctagagaagacccgcttcagcatcctaccacctaaacccttcagt
gatggtggcgtgggtcagtctcaggatgacagcatcgtgggcactaagcagtgcaggcac
agcgtggccatcatgcccatccctggcagcctctcatccagcagccctgacctgctgcag
ccagccactaatgtattggacttctccaatccagcagccgtgggcttctactacattcca
gaccaggtgatccgggtgttcaaggccgaccagcagagctgttacatcatcatcagcaag
gacaccacggcgaaggacgtggtcagtcacgtggtcaacgagtttggcctgagcgcggcc
ccggagaactactccctctgtgaagtgtcggtcagccccgagggcgtcatcaaacaacgc
aggctacctgaccagctctccaagctggctgaccgcatacagctcaacggcaggtactac
ctgaagaacaacatggagacagagacgttgtgttcagacgatgacgcccaggagctgctg
aaggagagtcacatcaccctgctccagctcagcacggtggaggtggccgcccagctctcc
atgagggactttgagctgttccgtaacatcgagtccaccgagtacgtggacgaccttttc
aagctactggactcctcggggggagtccagcagacgcgcctcaagcagtttgaggaggtc
atcaaccaggagaccttctgggtcgccacggagatcctgagggagcccaacgccatgaaa
aggatgaagaccatcaaacacttcatcaagattgctctgaactgtcgagagtgcaagaac
ttcaactccatgttcgccatcatcagtggcctaaatctggctccgatagctcgtctcagg
tcatcgtgggagaagctgcccagtaagtacgacaagctgttccgcgacctgcaggacatc
ttcgacccgtccaggaacatggccaagtaccgcaacgtcctgagcagccagagcatgcag
ccacccattatccccctgttccccgtcgtcaagaaggacctcacgttcctacatgaaggt
aatgactctaaagtagacggtctggtgaactttgagaagctgaggatgatcgccaaggag
atccgtcacgttgtccgtatgacctcagccaacatggacccagctcttatgttccgacag
aggaagaagaggtggaagagtttagggtctctgagtcagggcagtaccaactccaacatg
ttggacgtgcagggcggggcccacaagaagcgcgtgcgtcgcagctcgctgctcaacgct
aagaagctgtacgaggacgctcagatggcccgtaaggtcaagcagtacctgtccaacctg
gcggtggagacggacgaggagaaacaccagattatgtctctacagtgtgagcctgtttac
agcaccttgtccaagaacctgagcgagcgacggtccaccaagtctgacatttctcctgtg
tcgctgcgctcggcgctgcccggggggaaggcccagaaccgcgtgtcccaggtgctacag
atccaggtacccctctacccccaacggaagaagagcaccgccaaggacattcacgccaca
cacaactccagctctcccctagtgataaagaggcctcccagctcccagctcagccaatca
gaggacagtccctggagtgggaagaggtctgctgaagacaccgtgtccatcgtgtcctcc
ctgcactccagccccaccatctcgccacagggctccccgcgcaaagtgggtggcatggcc
aagcctcagcataactccaacagccaaatgaacatgtctggctcgtcgtcctctctgacc
agcgaggccagcaccaaggcgggcacggcgggcacccgcagctacggcataggctatgcc
ctgatgcctgcagtgaaatccgacaacctgtccgactccagccacagtgagatctcgtcc
cgctccagcatcgtcagtaactgctctgtggactcaatgcctgctggccctgtagaggag
cgccaaggcaccaaggccagggacaccactgaggctccaggcatcaccatgcagctcaca
cacgccgactctgactgcagccagcccagcaccagttcgttggcgcggggccaggtgatg
cggggttccaccttcacctcctccacctccacagaggagctgactcccgaccacgtctcc
ctggacagtgtggccgacagcgggcggggcagctggacctcctgctcctccaactcccac
gacagctttcagagcttgcctgtccccctgctgggccgaccccccacctgggaccaccta
gtgcctgggggtttccgccacacccagctagcagggcctatagtggaggttgaggctggg
ccggcctgggttggggtagcgggaggaccgggggcgggatccgggggaggagaggacgcc
aagaggctctccagagacagttcagagctaaaccaatcacgacagagctgggcctcatcc
tcctcgctgtcggacacctacgaggggaactacggcaccatcaaacgccgcactaccgaa
ggcgtctccgccgcccctggggagagccctgacgtaccccaaagcacagatcccgtctac
aaaatggtcacctcaagcacagagaaaggcctcatagtgtactgtgtaacctcccccacc
aaggacgataggtacagggggcctccccccacccctccgggataccagggcctcaccctg
gtcgatggacaggatggagctcccctgcgaccgtcccacttgcggccgcctgactatagc
gtggctctgcagaggtctaagctgctacagagccccggaggcctggtggaggcccggaga
ctgggggtgaacctcccccaccacgaatcccagagccagtcccggccggccagcgtctgc
cttcagggcctaggggatagtgaggatgatgagcaggtgtcagcggtgtag
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