Oncorhynchus keta (chum salmon): 118392167
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Entry
118392167 CDS
T09424
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 homolog isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118392167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118392167
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oke04054
]
118392167
Membrane trafficking [BR:
oke04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
118392167
Pattern recognition receptors [BR:
oke04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118392167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
UPA-FIIND
CARD
Motif
Other DBs
NCBI-GeneID:
118392167
NCBI-ProteinID:
XP_035639754
LinkDB
All DBs
Position
13:30511218..30520035
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AA seq
424 aa
AA seq
DB search
MATLKQQDTLMECLSCSHLKTAEIWIALEPLVSTENEISIYRLESIAGRYECTISGLRWV
CESKVTLLYHFSSWDPHRALLQSMGYRQAGPLLDIKIIEGKLKEVHLPHFACFGARMDIS
YTEQDIVLFTWEFSIHIKINVLIKLIMFWFLSILGVGDCYDPSIKQKVRVLHVEGSGVSI
EQVDKVTRFHVKVLHPSFSLRGVILQALGCSVHCDLQIYRARTAHLTLHAYLMPCDPALT
QAVEKQEKCHGSTRILKPRPEKSQWLTSDFYLTTSCPSDVNPRRLELAYVDPPNFFEVFI
RDADLDFSLNLSCKSRKQTIWNHEIRAAEYRGSILTSDQHFVDLHQTALIDRVSQVGPIL
DRLLKSGIITADGYSDVTAERNNQKKMRALFDGPLKGCGPECKDQFLEILTELEPYLINH
LKLE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggccacgttaaaacaacaagatactctgatggaatgcttgagttgcagccatcttaag
accgcagaaatttggattgcgcttgagccgttagtgtctacagaaaatgagatttcaatc
tacagacttgaatctatcgcaggacgctatgagtgcacaatatcagggctgcgctgggta
tgtgagagcaaagtcacacttctgtaccacttcagctcttgggatcctcacagggcattg
ctacaaagcatggggtacaggcaagcaggccccctactggacatcaaaatcattgaagga
aaactgaaagaagtgcatctgccacattttgcctgttttggtgcacgtatggatatcagc
tatactgaacaagacattgttttatttacctgggaattctcaatacatattaaaataaat
gttttaatcaaactgataatgttctggtttctgtccattttaggggttggagattgttat
gatccctctataaagcagaaagtgagagttcttcatgtagaaggcagtggtgtgtccata
gaacaagtggataaggtcacccgcttccatgtcaaggttctccatccatctttctctctg
agaggtgttatcctgcaggcattagggtgttccgtgcactgtgacttgcagatctaccga
gccaggacagcacacctcacgctacatgcatatctgatgccatgtgatcctgcactaaca
caggcagtggagaaacaggagaagtgtcatggatccacaaggatcctaaaaccaagacca
gagaagtcccaatggttgactagtgatttctacctcacaacatcctgtccttctgatgtt
aaccctcgtagattggagctcgcatatgttgacccaccaaacttctttgaggtgtttata
agagacgcagatttagacttcagtctgaacctaagctgtaaaagtcgtaaacaaaccata
tggaaccacgaaatacgagcagctgaatacaggggttccatcttgacctcagaccagcac
tttgtggacctccaccagacagccctgattgacagagtgagccaagtcggtcccatcttg
gacagactcctgaagagtggaatcatcactgctgatggctacagtgacgtgacagctgaa
agaaataaccagaagaagatgagggcgctctttgatgggcccttgaaagggtgtggcccc
gaatgcaaagatcagttcttagagatcctgacagagctggagccatacctaatcaatcac
ctgaagctggaatga
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