KEGG   Oncorhynchus keta (chum salmon): 118393434
Entry
118393434         CDS       T09424                                 
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04010  MAPK signaling pathway
oke04137  Mitophagy - animal
oke04141  Protein processing in endoplasmic reticulum
oke04210  Apoptosis
oke04217  Necroptosis
oke04621  NOD-like receptor signaling pathway
oke04622  RIG-I-like receptor signaling pathway
oke04920  Adipocytokine signaling pathway
oke05132  Salmonella infection
oke05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    118393434
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    118393434
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    118393434
  09143 Cell growth and death
   04210 Apoptosis
    118393434
   04217 Necroptosis
    118393434
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    118393434
   04622 RIG-I-like receptor signaling pathway
    118393434
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    118393434
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    118393434
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118393434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118393434
   04121 Ubiquitin system [BR:oke04121]
    118393434
Enzymes [BR:oke01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118393434
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     118393434
Ubiquitin system [BR:oke04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    118393434
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_4 zf-C3HC4_2 zf-C3HC4_4 Sina_ZnF zf-RING_6 zf-RING_5 ATG16 zf-ACC MATH
Other DBs
NCBI-GeneID: 118393434
NCBI-ProteinID: XP_035641994
EnsemblRapid: ENSOKEG00005050482
LinkDB
Position
14:41487139..41500967
AA seq 576 aa
MAAQEPSPPSSLEGNKPGFPKKILANNLEEKHMCNSCLKILRRPLQAQCGHRFCSFCFNK
IVSSGPHKCSACIKEDLFEDPTSILKEGGAFPDNAARREVEALAAVCPNEGCTWTGNIKE
YEVNHEGKCDFMIILCPSCKELMRTNELERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRAPCRFHVVGCDMSVEKEKTHDHERACS
YEHLNLLLHFIMGIKVSLESLQPQSLELAGHKIHELHQALRELELKLGQLTLGGGAPVQG
ACAPTLPTLALPALATSFTPLPSAVGAALELQLHSEKTKVAELSRRCQELELKVGTFENI
VCVLNREMERSSTTIEAYNRQHRLDQDKVEILNNKVRQLERTVGLRDLSIVEMEGNIREM
SAATFDGIFVWKISDFTKKRQDAVAGRAPAMFSPAFFTSKYGYKMCLRIYLNGDGTGRAS
HLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNI
ASGCPLFCPLPKLDTKNSYIRDDTIFIKAIVDLTGL
NT seq 1731 nt   +upstreamnt  +downstreamnt
atggctgcacaagagccatcaccaccatcttcactggaaggcaacaaaccaggattccct
aagaaaattttggcgaacaacctcgaagaaaaacacatgtgcaattcttgtttgaaaata
ttgagaaggcctctacaagcccaatgtggccatcgtttttgttcattctgtttcaacaaa
attgttagttctggaccacataaatgcagtgcttgcatcaaagaggacttgtttgaggac
cccacatctattcttaaagaaggcggtgcttttcctgacaatgcagcgcggagagaagtg
gaagcattggcagctgtttgtccaaatgaaggatgcacttggacgggcaatatcaaagaa
tatgaggtgaaccacgagggaaagtgtgacttcatgatcattctctgtccctcctgtaaa
gaactcatgagaaccaatgagctggagcgccacaacgaacgagaatgtcctgagaggact
ttaaactgcaaatactgcaaagaacctttccatttcaagaacatcaaggctcatgatgag
atctgtccaaagtaccctatgatttgtgaaggctgcgcaaagaaaaagattcccagagaa
aagtatgtggaccacatcaagttctgcagtaaattcagagcaccttgcagatttcacgta
gttggctgtgatatgtctgtggaaaaggagaagacccatgaccatgagcgtgcatgttcc
tacgaacacttaaatctactcttgcatttcatcatgggcatcaaggtgagcctggagagc
ttgcagccccagagcctggagctcgcaggtcacaagatccacgagctgcaccaggccttg
agagagctggagctgaagctgggacagctgactctgggtgggggagcccccgtgcaggga
gcctgtgcccctaccctccctaccctggccctccctgccctggccacctcctttaccccc
ctgcccagtgcggtgggcgccgccctggagctgcagctccacagtgagaagaccaaggtg
gcagagctgagccggcggtgccaggaactggagctgaaagtgggcaccttcgagaacatt
gtctgtgtcctcaaccgagagatggagcgctcctccaccaccattgaggcctacaaccgc
cagcatcgcctggaccaggacaaggttgagatcctcaataacaaggtgcgtcagctggag
agaactgtgggcctgagagacctgtccattgtggagatggaggggaatattcgggaaatg
tctgcagctacgtttgatggtatctttgtctggaaaatctccgatttcacaaagaaaaga
caggatgctgttgctggcagagccccagctatgttctccccagcatttttcaccagcaaa
tatggctacaagatgtgcctacggatttatctgaatggggacgggacgggacgggccagt
cacttgtctctgttcttcgtggtgatgaggggacacagtgacgccctcctcaagtggccc
ttcaaccagaaggtgaccctgatgctgctggatcagaataaccgagagcacataatcgat
gccttccgtcccgacatctcctcctcctccttccagaggcctgtcagtgacatgaacatc
gccagcggctgcccactcttctgccctcttcccaaactggacaccaaaaactcctacata
cgagatgatactatattcatcaaggctattgttgacctcactggcctctag

DBGET integrated database retrieval system