Oncorhynchus keta (chum salmon): 118393434
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Entry
118393434 CDS
T09424
Name
(RefSeq) TNF receptor-associated factor 2-like isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04137
Mitophagy - animal
oke04141
Protein processing in endoplasmic reticulum
oke04210
Apoptosis
oke04217
Necroptosis
oke04621
NOD-like receptor signaling pathway
oke04622
RIG-I-like receptor signaling pathway
oke04920
Adipocytokine signaling pathway
oke05132
Salmonella infection
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118393434
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118393434
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118393434
09143 Cell growth and death
04210 Apoptosis
118393434
04217 Necroptosis
118393434
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118393434
04622 RIG-I-like receptor signaling pathway
118393434
09152 Endocrine system
04920 Adipocytokine signaling pathway
118393434
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118393434
09171 Infectious disease: bacterial
05132 Salmonella infection
118393434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118393434
04121 Ubiquitin system [BR:
oke04121
]
118393434
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118393434
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
118393434
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
118393434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
zf-C3HC4
zf-RING_4
zf-C3HC4_2
zf-C3HC4_4
Sina_ZnF
zf-RING_6
zf-RING_5
ATG16
zf-ACC
MATH
Motif
Other DBs
NCBI-GeneID:
118393434
NCBI-ProteinID:
XP_035641994
EnsemblRapid:
ENSOKEG00005050482
LinkDB
All DBs
Position
14:41487139..41500967
Genome browser
AA seq
576 aa
AA seq
DB search
MAAQEPSPPSSLEGNKPGFPKKILANNLEEKHMCNSCLKILRRPLQAQCGHRFCSFCFNK
IVSSGPHKCSACIKEDLFEDPTSILKEGGAFPDNAARREVEALAAVCPNEGCTWTGNIKE
YEVNHEGKCDFMIILCPSCKELMRTNELERHNERECPERTLNCKYCKEPFHFKNIKAHDE
ICPKYPMICEGCAKKKIPREKYVDHIKFCSKFRAPCRFHVVGCDMSVEKEKTHDHERACS
YEHLNLLLHFIMGIKVSLESLQPQSLELAGHKIHELHQALRELELKLGQLTLGGGAPVQG
ACAPTLPTLALPALATSFTPLPSAVGAALELQLHSEKTKVAELSRRCQELELKVGTFENI
VCVLNREMERSSTTIEAYNRQHRLDQDKVEILNNKVRQLERTVGLRDLSIVEMEGNIREM
SAATFDGIFVWKISDFTKKRQDAVAGRAPAMFSPAFFTSKYGYKMCLRIYLNGDGTGRAS
HLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNI
ASGCPLFCPLPKLDTKNSYIRDDTIFIKAIVDLTGL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacaagagccatcaccaccatcttcactggaaggcaacaaaccaggattccct
aagaaaattttggcgaacaacctcgaagaaaaacacatgtgcaattcttgtttgaaaata
ttgagaaggcctctacaagcccaatgtggccatcgtttttgttcattctgtttcaacaaa
attgttagttctggaccacataaatgcagtgcttgcatcaaagaggacttgtttgaggac
cccacatctattcttaaagaaggcggtgcttttcctgacaatgcagcgcggagagaagtg
gaagcattggcagctgtttgtccaaatgaaggatgcacttggacgggcaatatcaaagaa
tatgaggtgaaccacgagggaaagtgtgacttcatgatcattctctgtccctcctgtaaa
gaactcatgagaaccaatgagctggagcgccacaacgaacgagaatgtcctgagaggact
ttaaactgcaaatactgcaaagaacctttccatttcaagaacatcaaggctcatgatgag
atctgtccaaagtaccctatgatttgtgaaggctgcgcaaagaaaaagattcccagagaa
aagtatgtggaccacatcaagttctgcagtaaattcagagcaccttgcagatttcacgta
gttggctgtgatatgtctgtggaaaaggagaagacccatgaccatgagcgtgcatgttcc
tacgaacacttaaatctactcttgcatttcatcatgggcatcaaggtgagcctggagagc
ttgcagccccagagcctggagctcgcaggtcacaagatccacgagctgcaccaggccttg
agagagctggagctgaagctgggacagctgactctgggtgggggagcccccgtgcaggga
gcctgtgcccctaccctccctaccctggccctccctgccctggccacctcctttaccccc
ctgcccagtgcggtgggcgccgccctggagctgcagctccacagtgagaagaccaaggtg
gcagagctgagccggcggtgccaggaactggagctgaaagtgggcaccttcgagaacatt
gtctgtgtcctcaaccgagagatggagcgctcctccaccaccattgaggcctacaaccgc
cagcatcgcctggaccaggacaaggttgagatcctcaataacaaggtgcgtcagctggag
agaactgtgggcctgagagacctgtccattgtggagatggaggggaatattcgggaaatg
tctgcagctacgtttgatggtatctttgtctggaaaatctccgatttcacaaagaaaaga
caggatgctgttgctggcagagccccagctatgttctccccagcatttttcaccagcaaa
tatggctacaagatgtgcctacggatttatctgaatggggacgggacgggacgggccagt
cacttgtctctgttcttcgtggtgatgaggggacacagtgacgccctcctcaagtggccc
ttcaaccagaaggtgaccctgatgctgctggatcagaataaccgagagcacataatcgat
gccttccgtcccgacatctcctcctcctccttccagaggcctgtcagtgacatgaacatc
gccagcggctgcccactcttctgccctcttcccaaactggacaccaaaaactcctacata
cgagatgatactatattcatcaaggctattgttgacctcactggcctctag
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integrated database retrieval system