KEGG   Oncorhynchus keta (chum salmon): 118393440
Entry
118393440         CDS       T09424                                 
Symbol
ercc6l2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6-like 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oke03400]
    118393440 (ercc6l2)
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    118393440 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 VIGSSK ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 118393440
NCBI-ProteinID: XP_035642006
LinkDB
Position
14:complement(41912922..41929286)
AA seq 1573 aa
MMASTSTADIKVWHEGDRCLAPSLRDGTLLREGTIQKLPSTSHGEDMALVKFTDQHDEDE
EEEAVFPVCKLQRPDTNQSSTSVVSAQEKPLFLCSQTPPGPSEPLVLSQSGVAVPYTINR
YLRYYQKEGIQFIYDNYAQSRGCILGDDMGLGKTIQVIGFLAAVLGKTGTWEDIENNRPQ
FLLTQIPTQRSKPRKVFLIVAPLSVLYNWKEELETWGHFLTVVVHGLRKEEELARIRRGR
SEIALTTYETLRLYLEQFNSIDWSAVIVDEAHKIKNPNSQITGAMKDLRCPVRVGLTGTI
LQNNLDELWCVMDWAIPRCLGSLGNFKNMFSDPIELGQKHSVTKRALATGRRAVRALAAK
LSHWFLRRTKALIREQLPKKDDRVVYCSLTSFQQTVYQAVLDTEDVTLLLRSSEKCDCHS
GHSRRKCCYKVNARGVRVTDLYFSYLAILRKVANHAALLQAKWNTSKKQEQYVNEICEKV
FQKFPDFTEKCKQAAFEAMSDPMYSGKMKVLQRLLKHYMQRKDKVLLFSLSTKLLDVLES
YCMADGLEYSRLDGNTKPRERLKIVKEFNSCPDINLCLVSTMAGGLGLNFVGANIVVLFD
PTWNPANDLQAIDRAYRIGQCRDVTVFRLISLGTVEEVIYLRQVYKQQLQSSVMGKESAR
RYFDAVQGSDDXEGELFGIQNLFRLQTQGTCLTRRILEREGRVEVGVMTSSTHTGEEEER
KSESEAGEVSARDHCELGNGGASRIPRATTRGVLDFSSGSEEEGEQGDRSKVEKANTTLP
GRLSLLQHGFSRLLQRSGVRAGSGSESGEHSQSEGGRSDSEEDSDEDTSAMAPKGLSTAG
SGGPQTPTLAPKCGNHLDAAPLKNDWDVSSGSEREEERNGGRWDGQRGRDHDPVTLSGES
DDMGRKILNLKQGIRRKRRVEEDSDDDSPPSSGSKRSNTKTPVSRMHQVMFDSESEDIDI
EELIRACAQTHVLKRPPAHRRRREMGRDGGSKRETSNRPVDQSRRTRQAEDIETFTSSDE
NHTAVERVRSVTAPQNHNHGRGPQTDQHGARAFTNPKVNQTVPSAKGPPWGTIDNVLGGV
REVVYTHSNQHVVGGSKAEERISRAALRDVFERRRFSQLPANELRDTQKTQPEHTPPFHT
SHNDVGWVGAVHRPSVDHPVTHTIRSVHHPTQHTTVIIGETPGTIRRQQLEEMACVFGSV
SLRQFAEEVLRSTSAQRLAQLRQYYTDQGPDVASTIRENFAEPHTAQPKVNRTTPSSSTT
KHRPNSKRNQRVALEPQAEPRTRHRSVPEPQRDVPSSEEQMVRNARGGKKKSGNSGMSRA
AQCSSSDLDNSRSSPLGPGPSRAQPVSSSSSSSSALSHPQAKPTASPQRGRSSLLSSPRK
SEVVGRQRYRAQPSFPPSQQVLLTELLGDTSILDDLLRPRSKASSEPQRAFPKTPTSRAV
FTPTSHSATPASCHPTMPPKPPSTPHPRPLTKSVPGPSSTTTTPPSRSITTPLTHPITPL
FSPTPERSKNSHRDFWDILEEGNEERINKLTDPSEVERVCESASVRARGGTGGGEEKGNT
SLWKRNDKFLWKK
NT seq 4722 nt   +upstreamnt  +downstreamnt
atgatggcttcaacttccacagctgacataaaagtgtggcatgagggcgacagatgcctc
gctcccagcctcagagatggcaccctactacgagaggggacaatccagaaactcccttcc
acttctcatggtgaggacatggcactggtgaagttcacagatcaacatgatgaagatgaa
gaagaggaggcagtctttccagtctgtaaactccagagaccagacacaaaccagtcgtcc
accagtgtagtgtctgcccaggagaagcctctattcctctgcagccagacacctcccggg
ccatcagagcccttggtgttgtcacagagtggtgtggcagtcccatataccatcaacagg
tacctgaggtactaccagaaggaagggatccagttcatctatgacaactatgcccagtcc
agaggatgtatcctgggagatgacatgggtctgggcaagaccattcaggtcattggtttc
ctggctgctgtgctgggtaaaacagggacatgggaagacattgagaacaacaggcctcag
tttcttcttactcagatccccacacagcgaagcaaaccccgaaaggtgttcttgattgtg
gcccctctgtcggtgctgtacaactggaaagaggagctggagacgtggggtcacttcctg
accgttgtagtccacggtctgaggaaagaggaggagctggctcgcatccggaggggacgc
tctgagatcgccctcaccacctacgagaccctacgcctctatctggagcagtttaacagc
attgactggtctgctgtgatagtggacgaggcccacaagatcaagaaccccaactcccag
atcactggggcaatgaaggatctgaggtgtccggtcagagtgggcctcactggcacaatc
ctgcagaacaacctggatgagctctggtgtgtcatggactgggccatccctcgttgcctt
ggcagcctgggtaacttcaagaatatgttttcggaccccatcgaactggggcagaagcac
agtgtaactaagcgggccctagcgacgggcaggagggcggtccgggccctggctgcgaag
ctctcccattggtttctccggaggaccaaggctcttatcagagagcagctgcccaaaaaa
gacgacagggtggtgtactgttcgctgacgtcgttccagcagactgtgtaccaggcggta
ctggacacggaggacgtcaccctgctcttgcgctcctcagagaagtgtgactgtcacagt
ggacactcccgcaggaagtgctgctacaaggtgaatgctcggggtgtgcgtgtgacagac
ctgtacttcagttacttggccattctcaggaaggtggccaaccacgcggctttactgcaa
gccaagtggaacaccagcaaaaagcaggagcagtatgtgaatgagatctgtgagaaggtg
ttccagaagtttcctgacttcacagagaaatgcaagcaggcagcatttgaggccatgtca
gaccccatgtacagcggaaagatgaaggttctccagaggttgttgaaacattacatgcag
agaaaagacaaagtgctattattctccctctccactaagctgctggacgtgctggagagc
tactgcatggcagatgggctggagtatagcagattggatggcaacaccaagcccagagag
aggctgaagatcgtcaaagagttcaacagctgccctgacatcaacctctgcctggtctcc
accatggcagggggtctgggcctgaactttgtcggggccaacattgtggtcctgtttgat
cccacctggaaccctgccaatgacctgcaggcaattgacagggcatatcgtataggccag
tgcagggacgtgacagtgttcagactcatctctctgggaacagtggaggaggtcatctac
ctgcgccaggtctacaaacagcagttgcagtcttctgtgatgggtaaggagagtgcccgg
cggtactttgatgcagtgcaggggtccgacgacncagaaggggagctgtttgggatacag
aacctcttcaggctgcagacccaggggacctgcctcaccaggagaatactggagcgggag
ggacgagtggaggtaggagtaatgacgtccagcacccacacaggggaagaggaggagagg
aagagcgagagcgaggctggggaggtttccgcaagggaccactgtgaactgggcaatgga
ggggcctcgaggatccccagggcaacaaccaggggggtattggacttcagcagtggcagt
gaggaggagggggaacagggggacaggagtaaggtggagaaggcgaacactacccttcct
ggccgactcagtctccttcagcatggcttctccaggttgctccagaggtcaggggtcagg
gctggatcagggtcagaatcaggggagcatagccagagtgaggggggaagaagtgattct
gaggaggacagtgatgaagacacttctgccatggcaccaaagggcctcagcaccgcaggg
agtgggggcccccagacccctacattggcccccaagtgtgggaaccacttggatgcagct
cctctgaagaacgactgggacgtctccagtggctctgagagagaggaagaaaggaatgga
gggagatgggatggacagagggggcgagaccatgatcctgttacactgtcaggagagagt
gatgacatggggagaaaaatactaaatctgaaacaaggaataaggaggaagaggagggtg
gaggaggacagtgatgatgattcacccccctccagtggaagcaaacgatctaacactaaa
actccagtttccagaatgcaccaggtgatgtttgactctgagtctgaggacatagacatt
gaggagctaatcagagcttgtgcacaaactcatgtgcttaagagacccccagcacaccga
agaaggagggagatggggagagatggtggtagtaagagagagaccagcaacagaccagta
gaccagagtagaagaaccagacaagcagaggacattgagacgtttacctcctcagacgaa
aaccacactgcagtcgaaagagtccgatctgttacagccccacagaaccacaatcatggc
cgaggcccacagacagaccaacacggagcgagggcgtttacaaacccaaaagtgaaccag
actgtcccttctgccaaaggaccgccctggggaacgattgacaatgtgttaggtggtgta
cgggaggtggtttacacccactctaaccaacatgtggtgggcgggagcaaggccgaggag
cgaatcagcagagccgctctcagagacgtgtttgagcgcaggaggttctcccagcttcca
gccaatgaactccgggacacacagaagactcagcctgaacacactccaccattccatact
tcccataatgatgttggttgggtgggagcagtgcacagacccagtgtggaccacccagtc
acacacaccatcaggagcgtccaccaccccacccaacacaccaccgtcattatcggagag
acccccggaaccatccgaaggcagcagctggaggagatggcgtgtgtatttggatctgtt
tcattgagacagtttgctgaggaggttctgaggagtacctctgcccagagactggctcag
ctacgacagtactacactgaccaaggccctgacgtggcttccaccatcagggagaacttc
gcagaaccacacacagcccagcccaaagttaacaggacaacaccttcctcctctacaacc
aaacacagacccaactccaaaaggaaccagagagttgctctagaaccccaagcagaacct
agaacccgacataggtccgttccagaaccccagagggatgttccctcttctgaggagcag
atggtccggaacgccagaggagggaagaagaagagtggtaatagtggaatgtccagagct
gctcagtgctccagctcagacctggacaatagtaggagtagtcctctgggaccagggccc
tctagagctcaacctgtttcctcctcctcctcttcttcttcagctctcagccatccccag
gctaagcccacagccagccctcagagagggaggagcagcctgctgtcctcccccaggaag
agtgaggttgtggggaggcagcggtacagagctcagccttcctttccccccagccagcag
gtcctcctcacagagctgctaggagacacctctatcctggacgacctgctgcgacccaga
agcaaggcctcctcagagcctcagagggccttcccaaaaacccctacctcacgggctgtc
tttacacccacttctcactctgccacacctgcctcctgtcaccctacaatgcctcccaaa
ccgcccagcacaccccacccacggcccctgacaaaatccgtcccaggcccttcttctact
actactactcccccctctcgatccatcaccacacccctcacacaccccattacaccactt
ttctctccaacccctgagaggtcaaagaacagccacagagacttctgggacattttggag
gagggtaacgaggagaggatcaacaaactgacggacccgtcggaggtagagagggtgtgt
gagagtgctagcgtcagggccagaggaggaacagggggaggagaggagaaagggaacacg
tcactttggaagaggaacgacaagttcctgtggaagaagtga

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