Oncorhynchus keta (chum salmon): 118393619
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Entry
118393619 CDS
T09424
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00310
Lysine degradation
oke01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118393619 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118393619 (prdm6)
03036 Chromosome and associated proteins [BR:
oke03036
]
118393619 (prdm6)
Enzymes [BR:
oke01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
118393619 (prdm6)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118393619 (prdm6)
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118393619 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_11
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
118393619
NCBI-ProteinID:
XP_035642349
LinkDB
All DBs
Position
14:complement(52609793..52664813)
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AA seq
563 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPTYMQHWQQLFPQSQLKNGGITQLQPPDRVAVPVESLRQRPNLI
SSTSSSSALTPSSTSSSTPSVSSLAGLSQLSVPQIALFGQTLSSDIVSSDNTNLQAKELC
ISSSFKNDKGSRFKLTSDELDYYLYGQQRMEIIPLNNHTGDHNNRCDMCADNRNGECPMH
GPLHSLRRLVGTSSAAPAVPPPDVPDWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTW
IGPFAGVPLLLDKLQSGGVRNTRHLWEIYDQEGTLQHFIDGNEPSKSSWMRYIRCARHCG
EQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPTTVME
AMSRQETLQPLSKTGKGFSVALLRSMVFPHSPCSRSFSLMDKGGHADSGFNQMSSKNQRV
LASPTSTSQLSTEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQP
SELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCDRSFTQATQLS
RHQRMPNECKPISGESSESIEVD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaacccggtgaccctagcggatctgctttcttgaaagtggacccgacgtacatg
caacactggcagcagctcttccctcaaagccagttgaagaatggaggcattacgcagctg
cagccgccggacagagtagctgttccggtggaaagtctccgtcagcggccgaacctgatc
tcctccacatcatcatcgtcggctttaacaccttcctccacatcttcatcgactccatcc
gtttcatcattggcaggtttatctcaactatctgtgccacaaattgcactttttggacaa
actctctcttctgacattgtctcgtcagacaacaccaacctccaagcgaaagaactttgt
atatcctccagctttaagaatgacaaagggtccagatttaaactgacctccgatgagtta
gactactacctctacggacagcagagaatggagattatcccattgaacaatcacaccggc
gaccacaacaatcggtgtgacatgtgtgcagataaccgtaacggagagtgccccatgcac
gggcccctgcactcgctgcggcgcttggtggggacaagcagtgcagcgccggccgtgccg
cccccagatgtccctgactggctgcgggacctgccccgtgaggtgtgcctctgcaccagc
actgtgcccggccttggctatggcatctgtgccgcccagcgtatcccacagggcacctgg
atcggcccctttgcgggagtccccctcctcctggataagttgcagtcaggaggggtgcgg
aacacaaggcacttatgggagatctatgaccaggaagggacgttacagcactttattgac
ggcaatgagccgagcaagtcgagctggatgagatacattcgctgtgcacggcactgtggc
gagcaaaacatgatggtggtccagtacagatcatgtatattctaccgggcatgtatggac
attccaagaggaacagaactccttgtctggtacaatgacagctacacctccttctttggc
atccctctacagtgcattgcacaggatgaaaacttgaatgtaccaaccacagttatggag
gccatgagcagacaagagacgttgcagccgctcagtaaaacgggcaaaggtttctcggtg
gccctgctgcgctccatggtcttcccccactcgccctgctccagaagcttctccctgatg
gacaaaggtggccacgcggactccggcttcaaccagatgagctctaagaaccagcgagtc
ctagccagccccacctccaccagccagctgagcaccgagttcagtgactggcacctctgg
aagtgcggccagtgctttaagacgttcacgcaacgcatcctgctccagatgcatgtgtgc
acacagaacccagacagaccttaccagtgtggacactgctcccagtccttctcccagccg
tcggagctgcgcaaccatgtcgtcactcactccagcgaccggcccttcaagtgtggctac
tgtggccgggcatttgcaggagccaccactctcaacaaccacatccggacacacactggg
gagaagccattcaagtgcgagaggtgcgacaggagcttcacgcaggccacccagctcagc
agacaccagcggatgcccaacgagtgcaagcccatcagcggcgagagcagcgaatcaatc
gaggtggattag
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integrated database retrieval system
