Oncorhynchus keta (chum salmon): 118395470
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Entry
118395470 CDS
T09424
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00052
Galactose metabolism
oke00510
N-Glycan biosynthesis
oke00513
Various types of N-glycan biosynthesis
oke00514
Other types of O-glycan biosynthesis
oke00515
Mannose type O-glycan biosynthesis
oke00533
Glycosaminoglycan biosynthesis - keratan sulfate
oke00601
Glycosphingolipid biosynthesis - lacto and neolacto series
oke01100
Metabolic pathways
Module
oke_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
oke_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
118395470
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
118395470
00513 Various types of N-glycan biosynthesis
118395470
00515 Mannose type O-glycan biosynthesis
118395470
00514 Other types of O-glycan biosynthesis
118395470
00533 Glycosaminoglycan biosynthesis - keratan sulfate
118395470
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
118395470
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118395470
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118395470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118395470
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
118395470
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
118395470
2.4.1.90 N-acetyllactosamine synthase
118395470
Glycosyltransferases [BR:
oke01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
118395470
Membrane trafficking [BR:
oke04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
118395470
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of breast milk
118395470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
118395470
NCBI-ProteinID:
XP_052320305
EnsemblRapid:
ENSOKEG00005044353
LinkDB
All DBs
Position
16:8193029..8206967
Genome browser
AA seq
331 aa
AA seq
DB search
MRTTTGKWINKIRSRLWRYPLGVRFRERKSNERKCSKYKQVQANELRQETTETKTQELKK
CPDPSPLLVGPLRVEFSTPVSLDIVRKENPGLQEGGRYKPHDCVALQKVALIIPFRLRDE
HLKFWLYYLHPILQRQQLDYGVYVINQDGDNTFNRAKLMNIGYAEALKEYDYDCFVFSDV
DIIPMDDRNTYKCFSQPRHLSVSMDKYGFKLPYNQYFGGVSSLSKEQIMKINGFPNNYWG
WGGEDDDIFNRVNNRKMSLSRPYGVVGKCRMIRHERDKNNNDNPQRFKRIAHTLKTMDTD
GLNSLEYEVVAVEKHDLFTKITVDVGMPPED
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccaccacaggaaaatggattaataaaatcaggagtcgattatggaggtatccg
cttggagttagatttagggaaagaaaatctaacgaaagaaaatgctccaagtataagcaa
gtgcaagcaaacgagctgcggcaagaaactacagagaccaaaacccaagaattaaagaaa
tgcccagatccctctccacttctagttgggcctctcagggttgagttctctacgcctgtc
agcttggatatagtgaggaaggagaacccaggcctgcaggaaggaggtcgctacaaacca
cacgactgtgtcgccctccaaaaggttgctctcatcatccccttccgccttcgtgacgag
cacctcaagttctggctctactacctccatcccatccttcagcgccaacagctggactat
ggcgtctatgttatcaatcaggatggagacaacacgttcaacagggccaagctgatgaac
attggctatgctgaggccctgaaggagtatgactacgactgctttgtgttcagtgacgtg
gacatcatccccatggatgaccgcaacacctacaaatgcttcagccagcccagacacctg
tctgtctccatggacaagtatggcttcaagttgccctataatcagtactttggcggtgtc
tcatcgttgagtaaagagcagatcatgaaaatcaacggctttcccaacaactactggggc
tggggtggtgaagatgacgacattttcaacagggtgaataacagaaaaatgtctctctct
cgtccgtacggcgtagtcggaaaatgccggatgatccgtcacgagagagacaaaaataac
aacgacaatcctcagaggttcaagagaatagctcacacgttaaagacgatggataccgat
ggcctcaactctctcgagtacgaagttgttgcagttgaaaagcatgacctgttcacaaag
attacagtagacgtggggatgccacccgaagattaa
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