Oncorhynchus keta (chum salmon): 118395540
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Entry
118395540 CDS
T09424
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like isoform X1
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00052
Galactose metabolism
oke00510
N-Glycan biosynthesis
oke00513
Various types of N-glycan biosynthesis
oke00514
Other types of O-glycan biosynthesis
oke00515
Mannose type O-glycan biosynthesis
oke00533
Glycosaminoglycan biosynthesis - keratan sulfate
oke00601
Glycosphingolipid biosynthesis - lacto and neolacto series
oke01100
Metabolic pathways
Module
oke_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
oke_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
118395540
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
118395540
00513 Various types of N-glycan biosynthesis
118395540
00515 Mannose type O-glycan biosynthesis
118395540
00514 Other types of O-glycan biosynthesis
118395540
00533 Glycosaminoglycan biosynthesis - keratan sulfate
118395540
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
118395540
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118395540
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118395540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118395540
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
118395540
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
118395540
2.4.1.90 N-acetyllactosamine synthase
118395540
Glycosyltransferases [BR:
oke01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
118395540
Membrane trafficking [BR:
oke04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
118395540
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of breast milk
118395540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
118395540
NCBI-ProteinID:
XP_052320629
EnsemblRapid:
ENSOKEG00005006079
LinkDB
All DBs
Position
16:8219427..8227905
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AA seq
385 aa
AA seq
DB search
MLDSSLNFRLRRKGCALVVVLGVINLLVALFYFMGYSNGFSPNLYIQTQTRIETDFITVT
LPPEDIGHHDLNNSFVTLQTLKLHDIHLPNTTTTTTNNTTTTTTTSTTTTSWKKLEKCPD
PSPHLVGPLRVEFSTPVSLDTVRKENPGLQEGGRYKPHDCVALQKVALIIPFRLRDEHLK
FWLYYLHPILQRQQLDYGVYVINQDGDNTFNRAKLMNIGYAEALKEYDYDCFVFSDVDLI
PMDDRNTYKCFRQPRHLSVSMDKFGFKLPYNQYFGGVSALSKEQFLEINGFPNNYWGWGG
EDDDIFNRVSSRGMSISRPDSEVGKCRMIRHERDKLNDPNPQRFDRIQRTRLTMNTDGIN
SLKYEVVKVEKDPLFTKITVDVGKP
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactcatctctcaactttaggctgcggaggaaaggctgcgccttggttgtagtt
ttaggtgttattaatctcttagtggctttattttatttcatgggttactcgaatgggttc
tcaccaaacctatatatacagacacaaacgcgaattgaaactgattttattaccgtgaca
cttccaccggaagatattggacatcacgaccttaataacagctttgtaacattgcaaact
ctgaagcttcacgatatacatttacccaatacaactactacaacaactaataacactact
actactactactacttctactactacaacttcgtggaaaaagttagaaaaatgtcctgat
ccgtctccacatcttgttgggcctctcagggttgagttctctacgcctgtcagcttggat
acagtgaggaaggagaacccaggcctgcaggaaggaggtcgctacaaaccacatgactgt
gtcgccctccaaaaggttgctctcatcatccccttccgccttcgtgacgagcacctcaag
ttctggctctactacctccatcccatccttcagcgccaacagctggactatggcgtctac
gtcatcaatcaggatggagacaacacgttcaacagggccaagctgatgaacattggctat
gctgaggccctgaaggagtatgactacgactgctttgtgttcagtgacgtggacctcatc
cctatggatgaccgcaacacctacaaatgcttccgccagcccagacacctgtctgtctcc
atggacaagtttggcttcaagttgccctataaccagtactttggcggtgtctcagcgtta
agtaaggagcagttcctggaaatcaacggctttcccaacaactactggggctggggtggt
gaagatgatgacattttcaacagggtgagctctagaggaatgtccatctctcgtccagat
agcgaggttggaaaatgccggatgatccgtcacgaaagagacaaactgaacgacccaaat
cctcagaggtttgacagaatacaacgcacaagactgacaatgaataccgatggtataaac
tctctcaagtacgaagtcgtcaaagtggaaaaggatcctctgttcacgaaaatcacagta
gatgtggggaaaccttag
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