Oncorhynchus keta (chum salmon): 118397690
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Entry
118397690 CDS
T09424
Name
(RefSeq) exostosin-1c isoform X1
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
oke01100
Metabolic pathways
Module
oke_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
118397690
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118397690
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
118397690
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
118397690
Glycosyltransferases [BR:
oke01003
]
Glycan extension
O-Glycan
118397690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
118397690
NCBI-ProteinID:
XP_052326531
LinkDB
All DBs
Position
19:complement(40010981..40111531)
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AA seq
759 aa
AA seq
DB search
MQARKKYVLLGLCACCWLLLFYWGGGVQVRLLKLLGQQRGDVVRPWPDWTDRVLLPGYAQ
LEELQTGPGSAESPRQRHQAWTGIYKDSRCRMETCFDFTRCRRRGRDGFRVYVYPSEKGE
RGSESYRKILTSIGESRYYTTDPREACLFVLGIDTLDRDQLSGQFVPNLDDRIKGYPLWN
EGRNHLIFNLYSGTWPNYTEDLGFNIGQAILAKASLNTEHFRPGFDVSIPLFSKDHPQKG
GERGWLVRNTVPPRRKYLLMFKGKRYLTGIGSDTRNALHHIHNGKDIVSLTTCRHGKDWE
KHKDARCDHDNLEYERFDYQELLHNSTFCLVPRGRRLGSFRFLESLQAACIPVLLSNGWE
LPFSDVIQWNQAVIEGDERLLLQVPSTVHAVGNERVLALRQRTQMLWDAYFSSVDKIVLT
TLEIIKDRVFSHVSRNKYMWNALPGGLLVLPEYSTHLAHFPFYYLSLGVSPGQEFTAIIH
AVSPLVSQSQPIMKLLQVVSKSKYCSQIIILWNSEKPLPPRSKWPPMPVPLTVTDGRRKT
SSRFLPNVAIETEAVLSLDEDTVLLTSEVNFAFLVWMSFPERIVGYPPRSHFWDPVKNAW
GYTSKWTNEYSIVLTGAAFYHRYYHYLFSHYLPPSLRALVDRTSNCEDILMNFLVSAVTH
LPPIKVAQRKQYKELPSPQVRPHPSTVNLTNELPSPQGTKMSAPWANPEHFAQRQECVNS
FASWFGYMPLVHSQFRLDPLLFKDQVSVLRKKYKDLERA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcgtaagaagtatgtcctgctggggctgtgtgcttgctgctggctgctgctc
ttctactggggcggtggggtccaggtccgtctcctcaagctgctggggcagcagaggggc
gatgtggtgcgcccctggcccgactggaccgacagggtactccttccgggctacgcccag
ctggaggaactccagacggggcctggttctgccgagtccccccgccagcgtcaccaagcc
tggacgggcatctataaagacagtcgctgccgaatggagacctgcttcgactttacgaga
tgtcgacgtagagggcgggacgggtttcgagtgtacgtctacccgtcggagaagggtgag
cgcgggtcggagagctatcgtaagatactgacgtctataggcgagtcgcggtactacacc
acggaccctcgcgaggcatgtctcttcgttttggggattgacactctggaccgtgaccag
ctctcggggcagttcgtgcccaacttggatgatcgtatcaagggttacccgctctggaac
gagggacggaaccaccttatctttaatctgtactcgggcacctggcccaactacaccgag
gacctgggcttcaacatcggtcaggccatcctggctaaagccagcctcaacacggaacac
tttcggcccgggttcgacgtctccatccccctcttctccaaggaccacccccagaagggg
ggtgagaggggctggttggtgcgaaacacggtcccaccgcgcaggaagtacctgttgatg
ttcaaagggaagcggtatctaacgggcatcggctcggacacccgtaacgccctgcatcac
atccataacgggaaggacatagtgtccctcactacatgccgtcacgggaaggactgggag
aaacacaaagacgcccgctgtgaccatgacaacctagagtatgagaggtttgattatcag
gagctgctccacaactccaccttctgcctggttccccggggtcgtcgcctgggctccttt
cgcttcctagagtctttacaggcggcgtgtattccagtgttgctcagtaatggttgggag
ctgcccttctctgatgtcatccagtggaaccaggctgtcatagagggagatgagagattg
ctactgcaggtcccctctacagtgcatgcggtgggaaatgagcgagtcctagctctgagg
cagcggacccagatgctatgggatgcctacttctcctccgtggacaagatagtcctcacc
acactggagataattaaggaccgggttttctctcacgtctccagaaataagtacatgtgg
aacgccctgccagggggcctactggtcctgccagagtactccacacacctggcccacttc
cccttctattacctgagcctaggggtcagtccaggtcaagagttcaccgccatcatccat
gccgtctccccattggtctcccagtctcagccaatcatgaagctgctccaggtggtctcc
aagtccaaatactgttcacagatcatcatcctgtggaacagtgagaaaccactgcccccc
aggagtaaatggccccccatgcctgtccccctcactgtgacagacggtaggaggaagacg
agcagtcgtttcctgcccaacgtggccatagagacagaggcagtgctgagtctggatgaa
gatacagtcctgctgaccagtgaggtgaactttgccttcttggtgtggatgagctttcct
gagcgcatcgtgggctacccccccaggagtcacttctgggacccagtgaagaacgcgtgg
gggtacacctccaagtggactaacgagtactccatcgttctgacaggggcagccttctac
cacaggtactatcactacctgttctcccactacctgcccccttccctgcgggcgctggtg
gaccgcacctccaactgtgaggacatcctcatgaacttcctggtttccgccgtcacccac
ctgccgccaatcaaagtggcccagaggaaacagtacaaggagcttcccagcccacaggtg
aggccacacccatcaacggtgaatctgaccaatgagctgcccagcccacagggtacgaag
atgagtgctccgtgggccaacccggagcactttgcccagaggcaggagtgtgtgaacagc
ttcgccagctggttcggatacatgcccctggtccactcccagttccgcctggaccccctg
ctcttcaaggaccaggtgtctgtcctgcgaaagaagtacaaggacctggagcgtgcctga
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