Oncorhynchus keta (chum salmon): 118398222
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Entry
118398222 CDS
T09424
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118398222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118398222
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
118398222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
118398222
NCBI-ProteinID:
XP_035649249
LinkDB
All DBs
Position
19:complement(37921920..37935862)
Genome browser
AA seq
904 aa
AA seq
DB search
MMETDGDQNQGSTNGTTPSGVNSRPSPMNSMSLYERQAVQALQALQRQPNAAQYFQQLML
QQQINSAQLQNLAAVQQATFAASRQSSPATNSTSQTTSTTVTSVNVTTSGGGDITSTRAI
GPGSSGTSTISQSVLLGGSAAGQGQMYLRVNRSLRAPLSSQLIFMPGSTTTAAMATVTQQ
PQTQQQQQQEVTPTSSSNQSDNDQVQNLALRCVGSPKGVGVKTETPERGEIATYSLIQSS
HQQFNQSTQQSPTKPTQLQQSHIKIPTYIQSSNANLSSLNLKTGNHHSNTPSSPSTSVPL
SQLLLSGPNFGRGGAITTVNSAAAATHILVPTSSAPTQSHSYQMGAATIKPNVSTQTLVV
QPLQKSTINDKGGHGNGPIPIQPKTQQGLRMPLQLPSRNPPPILPAPPANNQASAAQPPP
HIPVQIVGARPSSIGNPQALALVQARNACSQDGATLLNSSNSASLLTMVASIASRERGAL
GKGVGLKSLQSAQEALTLAHVSHVQAQANQSPRLNQNQNCTLATSISSQSQAAISPPTLS
RSSLTLPLPLVEASSASTVVAANGENVCPQPPQGKSMKRKSESDAANEEDGPPPPHLVPM
SEHSPALSSSAMEAGTGPPSPSPVPSPSPALSVSRVGGGQGERAPPPQAVVKPHVLTHLI
EGFVIQEGAEPFPVSGPVKEPAGEDLAMDNPDASQPETVNTATVLKCEYCKSFAPARQFR
GTKRFCSLTCSKRYNVSCSQHFRLRQGLHLTHSDEDGVLRRRVPHRTSSEIASAKIAGRP
LPVKCRSESSRSDDISSCEEEEDDPMSFSPASSSSCHQPPPTLRLEGSPAPHFLPGSPAQ
WSVEEVSQFISSLQDCEELAANFLSQEIDGQALLLLREEHLMSTMNIKLGPALKICAHIN
NLKD
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagatggggaccaaaatcagggctctaccaatggaaccactccatcagga
gtgaactcccgcccctctccaatgaactccatgtccctgtacgagagacaggctgtgcag
gcccttcaggcgctgcagaggcagcccaacgcagcgcagtacttccagcagctaatgctg
cagcaacagatcaacagtgcccagctacaaaacctggctgcagtacaacaggccaccttt
gctgccagtcgccagtccagccctgccaccaacagcacctctcagaccaccagcactaca
gtcacatctgtgaacgtaaccacttctgggggaggggacataaccagcacccgcgctata
ggcccaggctcttccgggacatccaccataagccaatcagtgctgctgggtgggagtgca
gcaggacagggacagatgtatctgagagtgaaccggtctctgagggctcccctctcctca
caactcatctttatgcctggtagcacgacaaccgctgccatggcaacggtcacccagcag
ccacagactcagcagcagcaacaacaggaagttacacctacttcctccagcaaccaatca
gacaatgaccaggtgcagaacctggctttgcgatgtgtcggcagtcccaagggagtcggg
gtcaagactgaaaccccagagaggggtgaaatagcaacctactcccttatacagtcatct
caccagcagttcaaccagtccactcagcagtctcccactaaaccaacccaactgcaacag
tcccacatcaagatccccacctacatccagagctccaacgctaacctctcctctctcaac
ctcaagacgggcaaccaccactctaacaccccctcctcaccctccacctctgtcccactc
tcacagctcctcctttccggacccaactttggccggggcggggctatcaccacggtgaac
tcggccgccgcggcgacgcacattctggtgcccacctccagtgcacccactcagtcccac
agttaccagatgggtgctgccaccatcaagcccaatgttagtactcaaacgctggtggtt
cagcctctgcaaaaaagcactattaacgacaagggaggccatgggaacggtcccattcca
atccagcccaaaactcaacagggtctccgtatgccactgcaactgccctcccgcaaccca
cctcccatcctccccgcgccccccgcaaacaaccaggctagtgccgcccagcctccgccg
cacatcccagtccagatagtaggggccaggccaagctccataggaaacccccaggctttg
gccttggtccaggcccggaacgcctgttcccaggacggagctacccttctaaatagctcc
aacagcgccagcctcctcaccatggtggcctccatcgcatccagagagagaggggcttta
ggcaaaggggtgggtctaaaaagccttcaatcagcccaggaagccctaacattggcccac
gtttctcacgtgcaagcacaagccaatcagagtcctaggctgaatcaaaatcaaaattgc
accttggccaccagcatctcctctcagtcccaggccgccatctctcctcccaccctctcc
cgttcctccctcactctacccctgccgttggttgaggcgagcagtgcatccactgtagtg
gctgccaatggagagaatgtgtgtcctcagcctccccagggtaagtcgatgaagaggaaa
tccgagtcagacgcagccaatgaggaagatggtcccccccctccacaccttgttcctatg
agtgaacactcccctgctctctcctcctccgccatggaagcaggcactggtccaccttct
ccctcccccgttccctctccttcccctgccctctcagtgtcccgtgtggggggtggccag
ggcgagagagccccccctccacaggctgtggtcaaaccccacgtcctcacccacctcata
gagggcttcgtcatccaggagggagctgaacccttccctgtgagtgggccagtgaaagag
ccagctggagaagatttggcaatggacaatccagacgccagtcagcctgagactgtgaat
acagctacagtgctgaagtgtgagtactgcaaaagcttcgccccagccagacagtttaga
gggaccaagcgcttctgctccttgacctgttccaagaggtataacgtgagctgcagccag
cacttccgcctgcgacaggggcttcacctcacccactctgacgaggacggagtcctgagg
aggagggttccccacaggaccagctccgagatcgccagtgccaaaatagccgggagaccc
ttaccagtcaagtgccgctccgagtccagccgttcggacgacatctccagttgcgaggag
gaagaggatgaccccatgtccttctccccggcctcctcctcttcctgtcatcagcctccc
cccacactccgattggagggctcaccggcgccccacttcctgcccggcagccctgcccag
tggagtgtggaggaagtgtctcagttcatatcatctctgcaagactgtgaggagctggcg
gctaatttcctgtcccaggagattgatggacaggccctgctgctgctcagagaggagcat
ctcatgtccaccatgaacatcaagctcggtcccgccctcaagatctgtgcccacatcaac
aacctgaaagactga
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