Oncorhynchus keta (chum salmon): 118398931
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Entry
118398931 CDS
T09424
Name
(RefSeq) exostosin-1b-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
oke01100
Metabolic pathways
Module
oke_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
118398931
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oke01003
]
118398931
Enzymes [BR:
oke01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
118398931
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
118398931
Glycosyltransferases [BR:
oke01003
]
Glycan extension
O-Glycan
118398931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
118398931
NCBI-ProteinID:
XP_052327881
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All DBs
Position
20:complement(5119977..5235203)
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AA seq
740 aa
AA seq
DB search
MQAKKRYLFLLSAGACLVLLFYFGGVQLPASGRNRHDRSHNGYRPDQPWPHFSDPLQQFI
PWDQLDTEEYNIHISPRQKRDVNTSVYKGKRCRMDSCFDFSACKNNDFKVYVYPQQKGEK
ISESYQNILSTVEGSRFYTTDPGQACLFILSLDTLDRDSLSPQYVHNLKTKVQNLHLWNN
GRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASISTENFRPNFDVSIPLFSKEHPRTGG
DRGYLKYNSIPPFRKYMLVFKGKRYLTGIGSDTRNALYHVHNQEDVVLLTTCKHGKDWQK
HKDARCDKDNAEYDKYDYREMLHNSTFCLVPRGRRLGSFRFLEALQAACVPVMLSNGWEL
PFSEIINWNTAAVIGDERLLLQIPSTVRSIHQDKILALRQQTQFLWEAYFSSMEKIVLTT
LEIIQDRVLQQESRSTLMWNSHPGGLFALPQYSAHLGDFPFYYATLGMKPYPKFTAVIHA
VTPLVSQSQPILKLLVAVAKSPYCAQIIVLWNCDKPLPAKHRWPVTSVPVIVIEGENKVM
SSRFLPYETIVTDAVLSLDEDTVLSTTEVDFAFTVWQSFPERLVGYPARSHFWDSNKERW
GYTSKWTNDYSMVLTGAAIYHRYYHFLYTNFLPASLKGMVDQLANCEDILMNFLVTAVTK
LPPIKVTQKKQYKETMMGQSSRASRWADPDHFAQRQTCMNKFASWFGGMPLVHSQMRLDP
VLFKDQVSILRKKYRDIERL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccaaaaaacgatatttattcctgctctccgccggtgcatgtctagttctactg
ttctactttggaggggtacaacttccagcgtcgggcagaaaccggcatgaccgtagccac
aatggatatcgcccagaccagccgtggccacacttctctgacccattacaacagttcata
ccttgggatcaactggacactgaggagtacaacattcacatatcaccgaggcagaagagg
gacgttaatacaagcgtgtacaaaggcaaaagatgtcgcatggattcgtgctttgatttc
tctgcatgtaaaaataacgatttcaaagtgtatgtctacccccagcagaagggggagaaa
atctcagaaagttaccagaatattttatcgaccgttgagggatccaggttctacaccact
gacccgggacaagcttgtctattcatcctgagcttggacaccctggaccgggactcgctc
tcgccgcagtacgtgcacaatctcaaaaccaaggtccagaaccttcatctctggaacaac
ggcaggaaccatctcatatttaacttgtactctgggacatggccggactacacggaagac
ctaggtttcgacataggccaggccatgttggccaaggccagcatcagtaccgagaatttc
aggcccaactttgacgtgtccatcccgctgttctccaaggagcaccctaggaccggaggg
gacagggggtacctaaagtacaactccatcccacctttcagaaaatacatgctcgtgttt
aaggggaaacgataccttacaggtatagggtcagacacgaggaatgccttatatcatgtc
cataatcaggaggacgtggtgctcctcaccacctgcaaacacggcaaggattggcagaaa
cacaaggacgcacgctgcgacaaggacaatgcagaatatgacaaatatgactacagagag
atgctgcacaactccactttctgcctggtgcctcggggcagacgcctgggatcctttcgc
ttcctggaggcactgcaagcagcctgtgtgcctgtgatgctgagtaacggttgggagctg
cccttctctgagatcatcaactggaacacggcggccgtcattggggacgagaggctcctg
ctgcagatcccgtccacggtgcgctccatccatcaggataagatcctagctctgaggcag
cagactcagttcctgtgggaggcctacttctcctccatggagaagattgtgctgactact
ctggagattatccaggaccgggtgctgcagcaggagtccaggagcaccttgatgtggaac
agccaccccggggggctcttcgccctgccacagtactctgcccacttgggagacttcccc
ttctactacgccaccctaggtatgaaaccgtaccccaagttcacggctgtcatccatgca
gtcacccccctggtctcccaatcccagcccatcctcaagctgttggtggctgttgccaaa
tcaccgtattgtgcacagatcattgtgctgtggaactgtgacaagcctctccctgctaag
caccgctggcctgtaacctccgtgcccgtcattgtcatcgagggagaaaacaaggtgatg
agcagtcgcttcctgccctacgagaccattgtcaccgacgccgtgctcagcctggatgag
gacactgtactctcaaccacagaggtggactttgccttcacggtgtggcagagcttccca
gagaggttggtgggctacccggcccggagccacttctgggacagcaacaaagagcgctgg
ggctacacttccaagtggaccaacgactactccatggtgctgaccggagctgccatttac
cacagatattaccacttcctgtacaccaatttcctgccagccagcctgaagggcatggtg
gaccagctggctaactgtgaggacatcctcatgaacttcctggtgacagccgtcaccaag
ctgccgcccatcaaggtcacccagaagaagcagtacaaagagaccatgatgggacagtcg
tcgcgggcgtcacgctgggctgacccggaccacttcgcccagcggcagacgtgcatgaac
aagttcgccagctggtttggcggcatgcccctggtccactcccaaatgaggctggacccg
gtgctgttcaaggaccaggtctccatcctgcgcaaaaaatacagggacatcgagaggctc
tga
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