Oncorhynchus keta (chum salmon): 118399271
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Entry
118399271 CDS
T09424
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
118399271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oke03036
]
118399271
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
118399271
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
DUF5001
Motif
Other DBs
NCBI-GeneID:
118399271
NCBI-ProteinID:
XP_035651100
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All DBs
Position
20:8009294..8021491
Genome browser
AA seq
903 aa
AA seq
DB search
MMETDGDQNQGSTNGTTPSGVNSRPSPMNSMSLYERQAVQALQALQRQPNAAQYFQQLML
QQQINSAQLQNLAAVQQATLAASRQSSPPANSTSQTTSTTVTSVNVTTSGGGAITSTRAI
GPGSSATSTISQSVLLGGNAAGQGQMYLRVNRSLRSPLSSQLIFMPSSTATTAMATVTQQ
PQTQQQQQREDTPTSSSNQSDNDQVQNLALRCVSSPKGVGVKTETPERGEPATYSLVQSS
HQQFNQSTPQSTTKPTQQQQSHIKIPTYIQSSNANLSSLNLKTGNHHSNTPSSPSTSVPL
SQLLLSGPNFGRGGAITTVTSATTATHILVPTSNAPAQPHSYQVAAATIKPNVSTQTLVV
QPLQKSTVNDKGGHGNGPVPIQPKTQQGLRMPLQLPSRNPPPILPAPPANNQTSAAQPPP
HIPVQIVGARQSSIGSPQALALVQARNTCSQDGATLLSSSSRASILTMVASITSREGGVI
NRRTDLKSLQSAQETLPLAHISHVHAQANQNQRPGLKPSPNCTLASSNSSQSQAAISPPT
LSHSSHTLPLPLVEASSTVVAANGESVCSQPPQGKSMKRKSESVAANDEDGAPPPHLVPM
SEHSPALSSATEAGSGPLSLSPSPSRSPALSMSRMGGGQGERAPPQQAVVKPHVLTHLIE
GFVIQEGAEPFPVSGPVKEPAGEDLAMDNLDSSQPETVTTATVLKCEYCKSFAPARQFRG
TKRFCSLTCSKRYNVSCSQHFRLRQGGHLSHSDEDGVLRRRVPHRTSSEIASAKIAGRPL
PVKCRSESSRSEDVSSCGEDEDDPMSLSPASSSSCHQPPPTLRLEGSEAPHFLPGSPAQW
SVEEVSQFISSLQGCEELADHFLSQEIDGQALLLLREEHLMSTMNIKLGPALKICAHINN
LRD
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagatggggaccaaaaccagggctctaccaatggaaccactccatcaggg
gtgaactcccgcccctctccaatgaactccatgtccctgtacgagagacaggctgtgcag
gcccttcaggcgctgcagaggcagcccaacgcagcgcagtacttccagcagctgatgctg
cagcaacagatcaacagtgcccagctacaaaacctggctgcagtacaacaggccaccctt
gctgccagtcgtcagtccagccctcccgccaacagcacctctcagaccacaagcaccaca
gtcacatctgtgaatgtaactacttctgggggtggtgccataaccagcacccgcgctata
ggcccaggctcctccgcgacatccactataagccaatcagtgctgctgggcggaaacgcg
gcaggacagggacagatgtatctgagagtgaaccggtctctgaggtctcccctctcctcc
cagctcatctttatgcctagtagcacggcaaccactgccatggcaacagtcacccagcag
ccgcagactcagcagcagcaacaacgggaagatacacctacttcctccagcaaccaatca
gacaatgaccaggtacagaacctggctctgcgatgtgtcagcagtcccaagggggtcggg
gtcaagactgaaaccccagagaggggtgaaccagcgacctactcccttgtccagtcatct
caccagcagttcaaccagtccactccacagtctaccactaaaccaacccaacagcaacag
tcccacatcaagatccccacctacatccagagctccaacgccaacctgtcctctctcaac
ctcaagacgggcaaccaccactccaacaccccctcctcaccctctacctctgtcccactc
tcacagctcctcctctccggacccaactttggccggggcggagctatcaccacggttacc
tccgccaccacggcgacgcacattctggtgcccacctccaatgcgcccgcccagccccac
agttaccaggtggctgctgccaccatcaagcccaatgttagtactcaaacactggtggtt
cagcctctgcagaaaagcactgttaatgacaagggaggccacgggaacggtcccgttcca
atccagcccaaaactcaacagggtctccgtatgcccctgcaactgccatcccgcaacccg
cctcccatcctccccgcaccccccgccaacaatcagactagtgctgcccagcctccgccg
cacatcccagttcagatagtaggagccaggcagagctccataggcagcccccaggctttg
gccttggtccaggcccggaacacctgttcccaggatggagctactcttctgagtagttcc
agcagagccagcattctcaccatggtggcctccatcacttccagagagggaggggtgata
aaccgacggacggatttaaagagccttcaatcagcccaggaaaccctcccattggcccac
atctctcacgtgcatgcgcaagccaatcagaatcagagacctgggctgaagccaagtcca
aattgcaccttggccagcagcaactcctctcagtcccaggcagccatctctcctcccacc
ctctcccattcctcccatactttacccctgcctttggttgaggcgagcagcaccgtagtg
gcagccaatggagagtctgtgtgttctcagcctccccagggtaagtcgatgaagaggaaa
tccgagtcagtcgcagccaatgacgaagatggtgcccctcctccccaccttgttccaatg
agtgaacactcccctgccctctcctccgccacggaagcaggctctggtccactttctctc
tccccctctccctctcgttcccctgctctctcgatgtcccgtatggggggtggccagggg
gagagagccccccctcaacaggctgtggtcaaaccccacgtcctcacccacctcatagag
ggcttcgtcatccaggagggagctgaacctttccctgtgagtgggccagtcaaggagcca
gctggagaagatttggccatggacaatctagactctagtcagcctgagactgtgactaca
gctacagtgctgaagtgtgagtactgcaaaagcttcgccccagccagacagtttagaggg
accaagcgcttctgctccttgacctgttccaagaggtataatgtgagctgcagccagcat
ttccgcctgcgacaggggggtcacctctcccactctgacgaggacggggtcctgaggagg
agggtcccccaccggaccagctccgagatcgccagtgccaaaatagcagggagaccctta
ccagttaagtgccgctccgagtccagccgatcggaggacgtctccagctgcggggaggac
gaggacgatcccatgtccctctccccggcctcctcttcttcctgccaccagcctccgccc
acactccgattggagggctcggaggcgccccacttcttgcccggcagccccgcccagtgg
agtgtggaggaagtgtctcagttcatatcatctctgcaaggctgtgaggagctggcggac
catttcctgtcgcaggagattgacggacaggccctgctgctactccgagaggagcatctc
atgtccaccatgaacatcaagctcggtcccgccctcaagatctgtgcccatatcaacaac
ctgagagactga
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